RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 GFM1Q96RP9 751 aaKnown RBP6.28□□□□□ -1.4
PTCD3-205ENST00000464541 POLDIP3Q9BY77 421 aaKnown RBP6.28□□□□□ -1.4
PTCD3-205ENST00000464541 WDR6Q9NNW5 1121 aaKnown RBP6.28□□□□□ -1.4
PTCD3-205ENST00000464541 WASH6PQ9NQA3 447 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 BEX4Q9NWD9 120 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-205ENST00000464541 HCN3Q9P1Z3 774 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 FZD10Q9ULW2 581 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 TTC3P53804 2025 aa6.28□□□□□ -1.4
PTCD3-205ENST00000464541 EBAG9O00559 213 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 CEP104O60308 925 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 POLBP06746 335 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 CTPS1P17812 591 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 CNTFP26441 200 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 HOXD3P31249 432 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-205ENST00000464541 ARRB2P32121 409 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 TMPRSS3P57727 454 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 YWHAZP63104 245 aaKnown RBP6.27□□□□□ -1.41
PTCD3-205ENST00000464541 FBXO43Q4G163 708 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 DCAF6Q58WW2 860 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 ATG9BQ674R7 924 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 PALB2Q86YC2 1186 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 ZDHHC17Q8IUH5 632 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 SAMD14Q8IZD0 417 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-205ENST00000464541 TBC1D22AQ8WUA7 517 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 RNF183Q96D59 192 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 EYA3Q99504 573 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 DCLK3Q9C098 648 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 INTS2Q9H0H0 1204 aaKnown RBP6.27□□□□□ -1.41
PTCD3-205ENST00000464541 SPATS2LQ9NUQ6 558 aaKnown RBP6.27□□□□□ -1.41
PTCD3-205ENST00000464541 PPP1R14DQ9NXH3 145 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 HSF4Q9ULV5 492 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 PCDHA7Q9UN72 937 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 GTF2A1LQ9UNN4 478 aa6.27□□□□□ -1.41
PTCD3-205ENST00000464541 TEX22C9J3V5 150 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 RGS14O43566 566 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 HOXC6P09630 235 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 XBP1P17861 261 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 FHL1Q13642 323 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 CAMK1Q14012 370 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 EDRF1Q3B7T1 1238 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 PLEKHO1Q53GL0 409 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-205ENST00000464541 HSP90AB4PQ58FF6 505 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 ZNF766Q5HY98 468 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 ZNF517Q6ZMY9 492 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-205ENST00000464541 CHD1LQ86WJ1 897 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 ASB5Q8WWX0 329 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 OTULINQ96BN8 352 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 CAMK1GQ96NX5 476 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 FUZQ9BT04 418 aa6.26□□□□□ -1.41
PTCD3-205ENST00000464541 BECN2A8MW95 431 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 I6L893 689 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-205ENST00000464541 LDB2O43679 373 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 SOX30O94993 753 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 ALPLP05186 524 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 PTPN2P17706 415 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 CD72P21854 359 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 DCTDP32321 178 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 TTKP33981 857 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 MLH1P40692 756 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 DSC1Q08554 894 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 FAM27E3Q08E93 113 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 ST3GAL1Q11201 340 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 TRAF1Q13077 416 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 GPS2Q13227 327 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 BAK1Q16611 211 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 NFIL3Q16649 462 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 FSCBQ5H9T9 825 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 Q6ZSV7 163 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 ZNF367Q7RTV3 350 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 MON1AQ86VX9 555 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 TMTC1Q8IUR5 882 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 DENND6AQ8IWF6 608 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 GDPD5Q8WTR4 605 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 RUFY2Q8WXA3 655 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 ELP4Q96EB1 424 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 MARK4Q96L34 752 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 MVB12BQ9H7P6 319 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 GGA3Q9NZ52 723 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 SLC25A10Q9UBX3 287 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-205ENST00000464541 PCDHGB5Q9Y5G0 923 aa6.25□□□□□ -1.41
PTCD3-205ENST00000464541 NPHP1O15259 732 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 ASAP2O43150 1006 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 LIASO43766 372 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 ZNF8P17098 575 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-205ENST00000464541 MYF6P23409 242 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 THBS3P49746 956 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 HTR6P50406 440 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 EGR4Q05215 589 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 Q0VFX4 171 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 FNBP1LQ5T0N5 605 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 MON1BQ7L1V2 547 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 C11orf65Q8NCR3 313 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 RASSF8Q8NHQ8 419 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 B4GALNT2Q8NHY0 566 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 HTRA1Q92743 480 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 APOLD1Q96LR9 279 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 NTPCRQ9BSD7 190 aaKnown RBP6.24□□□□□ -1.41
PTCD3-205ENST00000464541 TMEM204Q9BSN7 226 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 LHPPQ9H008 270 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms