RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CCDC15Q0P6D6 951 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 CNTN1Q12860 1018 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 SLC10A2Q12908 348 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 TFDP2Q14188 446 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 LBRQ14739 615 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 TFDP3Q5H9I0 405 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 TMCO4Q5TGY1 634 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF662Q6ZS27 426 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 ARMCX6Q7L4S7 300 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 ALYREFQ86V81 257 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 SLC41A1Q8IVJ1 513 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 CCDC50Q8IVM0 306 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 TSEN2Q8NCE0 465 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 FOXJ1Q92949 421 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 PPP1R16AQ96I34 528 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 RBM41Q96IZ5 413 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 EXOC2Q96KP1 924 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF830Q96NB3 372 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 CINPQ9BW66 212 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 ARRDC1-AS1Q9H2J1 176 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 LZTFL1Q9NQ48 299 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 DYRK4Q9NR20 520 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 DTLQ9NZJ0 730 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 LHX3Q9UBR4 397 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 SEPT3Q9UH03 358 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 EVLQ9UI08 416 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 PCDHGA5Q9Y5G8 931 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 HEY1Q9Y5J3 304 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 PLK4O00444 970 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 SLC7A4O43246 635 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 FTCDO95954 541 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 KRT10P13645 584 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 CCNCP24863 283 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 RENBPP51606 427 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 RWDD2BP57060 319 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 COPS2P61201 443 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 DYNLT1P63172 113 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 LLGL1Q15334 1064 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 SYCP2LQ5T4T6 812 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 MARC1Q5VT66 337 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 LYSMD4Q5XG99 296 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 KAZNQ674X7 775 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 TIGD7Q6NT04 549 aaPredicted RBP14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 BBS5Q8N3I7 341 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 DCLK2Q8N568 766 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 OR14C36Q8NHC7 312 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 FAM131CQ96AQ9 280 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 ARRDC3Q96B67 414 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 HSPA12BQ96MM6 686 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 TSGA13Q96PP4 275 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 PSKH2Q96QS6 385 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 OSBPL1AQ9BXW6 950 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 HDAC8Q9BY41 377 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 CPEB1Q9BZB8 566 aaKnown RBP14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 PCED1AQ9H1Q7 454 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 C6orf106Q9H6K1 298 aaPredicted RBP14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 PPP2R2CQ9Y2T4 447 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 CAPN6Q9Y6Q1 641 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 PIEZO1Q92508 2521 aa14.72□□□□□ -0.05
SQSTM1-205ENST00000464493 RALGAPA1Q6GYQ0 2036 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF292O60281 2723 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 hCG_1818297A0A087WSY0 165 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 BCLAF3A2AJT9 711 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 FAM47DPA6NHR8 397 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 LRRC72A6NJI9 287 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 METTL12A8MUP2 240 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 MIF4GDA9UHW6 222 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 MATN3O15232 486 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 INSIG1O15503 277 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 CST8O60676 142 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 ITPKAP23677 461 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 ITGB7P26010 798 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 RGRP47804 291 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 CSNK1DP48730 415 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 ADPRHP54922 357 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 HNRNPDQ14103 355 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF235Q14590 738 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 PPP2R5EQ16537 467 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF805Q5CZA5 627 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 AGBL4Q5VU57 503 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 DCAF12L1Q5VU92 463 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 NCEH1Q6PIU2 408 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 GDPD4Q6W3E5 623 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 ERN2Q76MJ5 926 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 BZW1Q7L1Q6 419 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 CYP2U1Q7Z449 544 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 SRLQ86TD4 932 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 RGL4Q8IZJ4 473 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 UBL4BQ8N7F7 174 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 CCNYQ8ND76 341 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 OR2T34Q8NGX1 318 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 PIGKQ92643 395 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 FATE1Q969F0 183 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 VOPP1Q96AW1 172 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 HDAC11Q96DB2 347 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 KDM4CQ9H3R0 1056 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 PACSIN2Q9UNF0 486 aaPredicted RBP14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 FAM186AA6NE01 2351 aa14.71□□□□□ -0.05
SQSTM1-205ENST00000464493 TBC1D3DA0A087WVF3 549 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TBC1D3IA0A087WXS9 549 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms