RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 GRM3Q14832 879 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 PRSS55Q6UWB4 352 aaPredicted RBP12.95□□□□□ -0.34
NUP58-206ENST00000463407 MYO19Q96H55 970 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 CCT7Q99832 543 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 PRDM12Q9H4Q4 367 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 TNPO3Q9Y5L0 923 aaKnown RBP12.95□□□□□ -0.34
NUP58-206ENST00000463407 ARVCFO00192 962 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 CLDN11O75508 207 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 CCT8P50990 548 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 IRF8Q02556 426 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 NKAPQ8N5F7 415 aaKnown RBP12.95□□□□□ -0.34
NUP58-206ENST00000463407 NETO2Q8NC67 525 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 ATL1Q8WXF7 558 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 THAP1Q9NVV9 213 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 HS6ST1O60243 411 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 RNASEH2AO75792 299 aaKnown RBP12.95□□□□□ -0.34
NUP58-206ENST00000463407 WDR47O94967 919 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 TKTP29401 623 aaKnown RBP12.95□□□□□ -0.34
NUP58-206ENST00000463407 ZNF844Q08AG5 666 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 GPM6BQ13491 265 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 GNA13Q14344 377 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 PFKFB4Q16877 469 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 FAM151BQ6UXP7 276 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 UBE2E3Q969T4 207 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 KLHL5Q96PQ7 755 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 SLC27A6Q9Y2P4 619 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 ROBO1Q9Y6N7 1651 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 BTNL10A8MVZ5 291 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 VPS4BO75351 444 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 RPL17P18621 184 aaKnown RBP12.95□□□□□ -0.34
NUP58-206ENST00000463407 LPOP22079 712 aaPredicted RBP12.95□□□□□ -0.34
NUP58-206ENST00000463407 PPP1R15BQ5SWA1 713 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 TTC33Q6PID6 262 aaPredicted RBP12.95□□□□□ -0.34
NUP58-206ENST00000463407 RASAL3Q86YV0 1011 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 LRRN4CLQ8ND94 238 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 TPD52L3Q96J77 140 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 FANCEQ9HB96 536 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 KLHL20Q9Y2M5 609 aa12.95□□□□□ -0.34
NUP58-206ENST00000463407 KRT8P05787 483 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 CNPP09543 421 aaKnown RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 LTA4HP09960 611 aaKnown RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 S100A5P33763 92 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 APLP1P51693 650 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 KLC1Q07866 573 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 VAC14Q08AM6 782 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 CAPRIN2Q6IMN6 1127 aaKnown RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 CNSTQ6PJW8 725 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 RIPOR1Q6ZS17 1223 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 TRIM69Q86WT6 500 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 BAP1Q92560 729 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 THAP11Q96EK4 314 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 LGMNQ99538 433 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 MORF4L1Q9UBU8 362 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 KLQ9UEF7 1012 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 A0A0U1RQJ8 604 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 COX7A2P14406 83 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 RPL7AP62424 266 aaKnown RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 ACSM2AQ08AH3 577 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 ACSM2BQ68CK6 577 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 STAG3L4Q8TBR4 150 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 SNX27Q96L92 541 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 IFI35P80217 286 aaPredicted RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 TLE2Q04725 743 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 DYNC1I2Q13409 638 aaKnown RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 OR14C36Q8NHC7 312 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 VPS33AQ96AX1 596 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 LRRC39Q96DD0 335 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 NDNQ99608 321 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 MRPS17Q9Y2R5 130 aaKnown RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 SLC45A1Q9Y2W3 748 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 MAN1A2O60476 641 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 C1RP00736 705 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 KELP23276 732 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 VARS2Q5ST30 1063 aaKnown RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 SPPL2AQ8TCT8 520 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 IKZF4Q9H2S9 585 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 COMMD8Q9NX08 183 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 AIF1P55008 147 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 RUNX1T1Q06455 604 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 RGS1Q08116 209 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 ZCCHC23Q6ZST2 131 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 TRPC4APQ8TEL6 797 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 AENQ8WTP8 325 aaKnown RBP12.94□□□□□ -0.34
NUP58-206ENST00000463407 SELENOMQ8WWX9 145 aa12.94□□□□□ -0.34
NUP58-206ENST00000463407 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 KLRG2A4D1S0 409 aaPredicted RBP12.93□□□□□ -0.34
NUP58-206ENST00000463407 H3BQF6 201 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 SGTAO43765 313 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 CCDC166P0CW27 439 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 NOS3P29474 1203 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 CDK18Q07002 472 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 TBL3Q12788 808 aaKnown RBP12.93□□□□□ -0.34
NUP58-206ENST00000463407 FASTKQ14296 549 aaKnown RBP12.93□□□□□ -0.34
NUP58-206ENST00000463407 ZNF618Q5T7W0 954 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 RFWD3Q6PCD5 774 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 ZNF621Q6ZSS3 439 aa12.93□□□□□ -0.34
NUP58-206ENST00000463407 DSELQ8IZU8 1212 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms