RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ZNF548Q8NEK5 533 aaPredicted RBP20.15■□□□□ 0.82
VARS-221ENST00000463184 IFI44Q8TCB0 444 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 MAPK15Q8TD08 544 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 GRAMD1AQ96CP6 724 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 NAF1Q96HR8 494 aaKnown RBP20.15■□□□□ 0.82
VARS-221ENST00000463184 PPARGC1AQ9UBK2 798 aaKnown RBP20.15■□□□□ 0.82
VARS-221ENST00000463184 IPO11Q9UI26 975 aaKnown RBP20.15■□□□□ 0.82
VARS-221ENST00000463184 HELZ2Q9BYK8 2649 aaKnown RBP20.15■□□□□ 0.82
VARS-221ENST00000463184 FPGTO14772 594 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 RAD51BO15315 384 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 TSPAN6O43657 245 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 CYP11B1P15538 503 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 CCNHP51946 323 aaPredicted RBP20.14■□□□□ 0.81
VARS-221ENST00000463184 TMPRSS3P57727 454 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 ARF5P84085 180 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 RHDQ02161 417 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 GNA12Q03113 381 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 MAN2A1Q16706 1144 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 BNIPLQ7Z465 357 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 RAB7BQ96AH8 199 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 ISG20Q96AZ6 181 aaKnown RBP20.14■□□□□ 0.81
VARS-221ENST00000463184 C1QTNF2Q9BXJ5 285 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 DPH1Q9BZG8 443 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 THSD1Q9NS62 852 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 HECAQ9UBI9 543 aaPredicted RBP20.14■□□□□ 0.81
VARS-221ENST00000463184 SALL4Q9UJQ4 1053 aa20.14■□□□□ 0.81
VARS-221ENST00000463184 MGAQ8IWI9 3026 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 TPP1O14773 563 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 AQP9O43315 295 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 ZIC2O95409 532 aaPredicted RBP20.13■□□□□ 0.81
VARS-221ENST00000463184 FLT3P36888 993 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 CFHR1Q03591 330 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 PDE1CQ14123 709 aaPredicted RBP20.13■□□□□ 0.81
VARS-221ENST00000463184 ISXQ2M1V0 245 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 IGF2-ASQ6U949 168 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 PCSK4Q6UW60 755 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 PARS2Q7L3T8 475 aaKnown RBP20.13■□□□□ 0.81
VARS-221ENST00000463184 ARCQ7LC44 396 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 MSANTD4Q8NCY6 345 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 TPCN2Q8NHX9 752 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 ENOX1Q8TC92 643 aaKnown RBP20.13■□□□□ 0.81
VARS-221ENST00000463184 KCNE4Q8WWG9 221 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 ASB12Q8WXK4 309 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 WBP1Q96G27 269 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 KLF6Q99612 283 aaPredicted RBP20.13■□□□□ 0.81
VARS-221ENST00000463184 RETREG1Q9H6L5 497 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 TMEM59LQ9UK28 342 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 FCF1Q9Y324 198 aaKnown RBP20.13■□□□□ 0.81
VARS-221ENST00000463184 DOCK4Q8N1I0 1966 aa20.13■□□□□ 0.81
VARS-221ENST00000463184 SYCE3A1L190 88 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 IGLON5A6NGN9 336 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 PLA2G2AP14555 144 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 JUNDP17535 347 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 TGM2P21980 687 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 ETFBP38117 255 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 DRAP1Q14919 205 aaPredicted RBP20.12■□□□□ 0.81
VARS-221ENST00000463184 TAF1BQ53T94 588 aaPredicted RBP20.12■□□□□ 0.81
VARS-221ENST00000463184 DPY19L2P1Q6NXN4 242 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 FAM131BQ86XD5 332 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 DENND6BQ8NEG7 585 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 BTN2A2Q8WVV5 523 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 CFAP57Q96MR6 1250 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 FUCA2Q9BTY2 467 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 NDST4Q9H3R1 872 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 ZDHHC6Q9H6R6 413 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 ASCL3Q9NQ33 180 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 KLF15Q9UIH9 416 aa20.12■□□□□ 0.81
VARS-221ENST00000463184 CPED1A4D0V7 1026 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 EME2A4GXA9 379 aaPredicted RBP20.11■□□□□ 0.81
VARS-221ENST00000463184 LSM8O95777 96 aaKnown RBP20.11■□□□□ 0.81
VARS-221ENST00000463184 CD160O95971 181 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 PRKCSHP14314 528 aaPredicted RBP20.11■□□□□ 0.81
VARS-221ENST00000463184 GEMIN4P57678 1058 aaKnown RBP20.11■□□□□ 0.81
VARS-221ENST00000463184 RAPGEF1Q13905 1077 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 PTK2BQ14289 1009 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 CDKN3Q16667 212 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 ZSCAN23Q3MJ62 389 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 VWA3BQ502W6 1294 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 ZNF805Q5CZA5 627 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 TRNP1Q6NT89 227 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 EFL1Q7Z2Z2 1120 aaKnown RBP20.11■□□□□ 0.81
VARS-221ENST00000463184 FAM114A1Q8IWE2 563 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 DRC7Q8IY82 874 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 IL12RB2Q99665 862 aa20.11■□□□□ 0.81
VARS-221ENST00000463184 NAT10Q9H0A0 1025 aaKnown RBP20.11■□□□□ 0.81
VARS-221ENST00000463184 C16orf96A6NNT2 1141 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 GOLGA8SH3BPF8 625 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 NEMP1O14524 444 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 KLK10O43240 276 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 SPINT1O43278 529 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 RBMS1P29558 406 aaKnown RBP20.1■□□□□ 0.81
VARS-221ENST00000463184 PFN3P60673 137 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 NRG1Q02297 640 aaPredicted RBP20.1■□□□□ 0.81
VARS-221ENST00000463184 EIF2B5Q13144 721 aaKnown RBP20.1■□□□□ 0.81
VARS-221ENST00000463184 NR0B2Q15466 257 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 ANO6Q4KMQ2 910 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 ARHGAP40Q5TG30 622 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 TAF3Q5VWG9 929 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 GUSBP11Q6P575 273 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 RYBPQ8N488 228 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms