RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CCDC14Q49A88 953 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 C5orf22Q49AR2 442 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 SETMARQ53H47 684 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 BRMS1LQ5PSV4 323 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 CDCP2Q5VXM1 449 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 ACAD10Q6JQN1 1059 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 GCNT7Q6ZNI0 430 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 PRPF39Q86UA1 669 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 CCDC117Q8IWD4 279 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 SPACA3Q8IXA5 215 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 MCOLN2Q8IZK6 566 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC22A18ASQ8N1D0 253 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZNF843Q8N446 348 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 SH2D3CQ8N5H7 860 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 C3orf20Q8ND61 904 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 OR4C6Q8NH72 309 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 RXFP2Q8WXD0 754 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 OR8D1Q8WZ84 308 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 CENPIQ92674 756 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 ARRDC3Q96B67 414 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 PSMB7Q99436 277 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 MYOCQ99972 504 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 FEM1AQ9BSK4 669 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 TKTL2Q9H0I9 626 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 PREBQ9HCU5 417 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 FZD3Q9NPG1 666 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 GPR27Q9NS67 375 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 SEPT11Q9NVA2 429 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 STAP1Q9ULZ2 295 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 NEU3Q9UQ49 428 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 HS3ST2Q9Y278 367 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 ARHGEF17Q96PE2 2063 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 C1QTNF3-AMACRE9PGA6 284 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 PRAMEF26H0Y7S4 382 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RRP8O43159 456 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 LZTS3O60299 673 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 MAGEC1O60732 1142 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RNGTTO60942 597 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 CNTN5O94779 1100 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 MT-CO1P00395 513 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 MT-CO3P00414 261 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 CCDC172P0C7W6 258 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 THEGLP0DJG4 465 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC2A3P11169 496 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 SKILP12757 684 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 SRCP12931 536 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 DGKAP23743 735 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RRM1P23921 792 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RFC1P35251 1148 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 PTPN9P43378 593 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 HDAC4P56524 1084 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RPL7AP62424 266 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZBED6P86452 979 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 ATP11AP98196 1134 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 OGDHQ02218 1023 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 DEUP1Q05D60 604 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 C19orf57Q0VDD7 668 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 CCDC173Q0VFZ6 552 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZNF211Q13398 564 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 DLG2Q15700 870 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 CDO1Q16878 200 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZNF284Q2VY69 593 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RABGAP1LQ5R372 815 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 FAM46CQ5VWP2 391 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 WDR59Q6PJI9 974 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 KDM7AQ6ZMT4 941 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 LRRC69Q6ZNQ3 347 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 DSG4Q86SJ6 1040 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 FAM131BQ86XD5 332 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RNF214Q8ND24 703 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 LSM14AQ8ND56 463 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 OR13H1Q8NG92 308 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 OR2A12Q8NGT7 310 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 KLK6Q92876 244 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 FGF11Q92914 225 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RNF34Q969K3 372 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 HIC2Q96JB3 615 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RPRD1AQ96P16 312 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 TRIM7Q9C029 511 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZNF212Q9UDV6 495 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 VPS51Q9UID3 782 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC25A13Q9UJS0 675 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 VANGL2Q9ULK5 521 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 CAPN11Q9UMQ6 739 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 NENFQ9UMX5 172 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZFR2Q9UPR6 939 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D30Q9Y2I9 924 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 RELNP78509 3460 aa8.09□□□□□ -1.11
CDC42BPA-210ENST00000462553 IGLV3-10A0A075B6K4 115 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 TEX51A0A1B0GUA7 166 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 A0A1W2PNU3 283 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 A0A1W2PQU0 124 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 SIGLEC16A6NMB1 481 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 TMCO5BA8MYB1 307 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 K7ERQ8 282 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 FFAR2O15552 330 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 CCP110O43303 1012 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 SNAP91O60641 907 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF821O75541 412 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 PIAS2O75928 621 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms