RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ZNF548Q8NEK5 533 aaPredicted RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 OR2AP1Q8NGE2 309 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 BTN2A2Q8WVV5 523 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 RXFP2Q8WXD0 754 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 GLMNQ92990 594 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 TBC1D31Q96DN5 1066 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 BMFQ96LC9 184 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 ZNF578Q96N58 590 aaPredicted RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 LENG8Q96PV6 779 aaPredicted RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 IL12RB2Q99665 862 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 C1QTNF7Q9BXJ2 289 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 NAA15Q9BXJ9 866 aaKnown RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 OSBPL2Q9H1P3 480 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 PRORYQ9H606 182 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 CHMP5Q9NZZ3 219 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 DNAI1Q9UI46 699 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 CSNK1G3Q9Y6M4 447 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 WDFY3Q8IZQ1 3526 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 URB1O60287 2271 aaKnown RBP15.64■□□□□ 0.09
SKA3-204ENST00000462482 POM121BA6NF01 834 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 ZSCAN5CA6NGD5 496 aaPredicted RBP15.64■□□□□ 0.09
SKA3-204ENST00000462482 IGLON5A6NGN9 336 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 AQP9O43315 295 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 USP12O75317 370 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 CSO75390 466 aaKnown RBP15.64■□□□□ 0.09
SKA3-204ENST00000462482 GFPT2O94808 682 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 NME1P15531 152 aaKnown RBP15.64■□□□□ 0.09
SKA3-204ENST00000462482 JUNDP17535 347 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 ACVRL1P37023 503 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 RPIAP49247 311 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 GABREP78334 506 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 CDR2Q01850 454 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 FZD2Q14332 565 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 SYCP1Q15431 976 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 DPY19L2P1Q6NXN4 242 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 BNIPLQ7Z465 357 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 LSM14AQ8ND56 463 aaKnown RBP15.64■□□□□ 0.09
SKA3-204ENST00000462482 OR6K2Q8NGY2 324 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 TPCN2Q8NHX9 752 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 IFI44Q8TCB0 444 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 LMX1AQ8TE12 382 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 ASB12Q8WXK4 309 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 SLC39A7Q92504 469 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 C11orf70Q9BRQ4 267 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 C1QTNF2Q9BXJ5 285 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 SAMSN1Q9NSI8 373 aaKnown RBP15.64■□□□□ 0.09
SKA3-204ENST00000462482 TMEM248Q9NWD8 314 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 TAB2Q9NYJ8 693 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 SPASTQ9UBP0 616 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 ZNF212Q9UDV6 495 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 DAAM1Q9Y4D1 1078 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 PCDHB1Q9Y5F3 818 aa15.64■□□□□ 0.09
SKA3-204ENST00000462482 TEX51A0A1B0GUA7 166 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 CPED1A4D0V7 1026 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 ANKRD62A6NC57 917 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 RNF103O00237 685 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 ATXN7O15265 892 aaPredicted RBP15.63■□□□□ 0.09
SKA3-204ENST00000462482 RAD51BO15315 384 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 NEBLO76041 1014 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 MPOP05164 745 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 UGT2B4P06133 528 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 PLEKP08567 350 aaPredicted RBP15.63■□□□□ 0.09
SKA3-204ENST00000462482 DESP17661 470 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 MMP8P22894 467 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 XPAP23025 273 aaPredicted RBP15.63■□□□□ 0.09
SKA3-204ENST00000462482 PTPN9P43378 593 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 NSFP46459 744 aaKnown RBP15.63■□□□□ 0.09
SKA3-204ENST00000462482 LSSP48449 732 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 UCNP55089 124 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 POLR2FP61218 127 aaKnown RBP15.63■□□□□ 0.09
SKA3-204ENST00000462482 C15orf59Q2T9L4 293 aaPredicted RBP15.63■□□□□ 0.09
SKA3-204ENST00000462482 MYLK3Q32MK0 819 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 CDCP2Q5VXM1 449 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 TRNP1Q6NT89 227 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 STRADAQ7RTN6 431 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 PHLDB2Q86SQ0 1253 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 TTC7BQ86TV6 843 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 CXorf40AQ8TE69 158 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 ARHGEF2Q92974 986 aaKnown RBP15.63■□□□□ 0.09
SKA3-204ENST00000462482 GRAMD1AQ96CP6 724 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 PCMTD1Q96MG8 357 aaPredicted RBP15.63■□□□□ 0.09
SKA3-204ENST00000462482 GDAP1L1Q96MZ0 367 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 POLR1BQ9H9Y6 1135 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 THSD1Q9NS62 852 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 SALL4Q9UJQ4 1053 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 RAI2Q9Y5P3 530 aa15.63■□□□□ 0.09
SKA3-204ENST00000462482 GOLGA4Q13439 2230 aaKnown RBP15.62■□□□□ 0.09
SKA3-204ENST00000462482 BUB1O43683 1085 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 IGSF6O95976 241 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 CYP1A1P04798 512 aaPredicted RBP15.62■□□□□ 0.09
SKA3-204ENST00000462482 GIMD1P0DJR0 217 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 KRT3P12035 628 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 MYF5P13349 255 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 RBMS1P29558 406 aaKnown RBP15.62■□□□□ 0.09
SKA3-204ENST00000462482 SOX5P35711 763 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 STAT1P42224 750 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 ERVPABLB-1P60509 514 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 CXADRP78310 365 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 TLE3Q04726 772 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 FGL2Q14314 439 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms