RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SRCP12931 536 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 GLDCP23378 1020 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SERPINB6P35237 376 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ACVRL1P37023 503 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SERPINH1P50454 418 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 CCR5P51681 352 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 VAV2P52735 878 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 KIF5AQ12840 1032 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SERINC3Q13530 473 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 DPYSQ14117 519 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 IFI16Q16666 785 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 LRRC38Q5VT99 294 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TBC1D3GQ6DHY5 549 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TXNRD3NBQ6F5E7 133 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TBC1D3CQ6IPX1 549 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TMCO3Q6UWJ1 677 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 LINGO4Q6UY18 593 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 PRPF39Q86UA1 669 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TMEM139Q8IV31 216 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 RHOT1Q8IXI2 618 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TBC1D3Q8IZP1 549 aaPredicted RBP13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 PCDH20Q8N6Y1 951 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 C1orf216Q8TAB5 229 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 CASKIN2Q8WXE0 1202 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ISG20Q96AZ6 181 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 CSPG4P5Q96PW8 444 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SCNM1Q9BWG6 230 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 LRRC19Q9H756 370 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 AASDHPPTQ9NRN7 309 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 DDX56Q9NY93 547 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 NEUROG3Q9Y4Z2 214 aa13.48□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 MCF2LO15068 1137 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 PJA2O43164 708 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ARHGAP6O43182 974 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SLC7A4O43246 635 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 BNIP3LO60238 219 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 PROS1P07225 676 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 COMTP21964 271 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 AMPD1P23109 780 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 NUDT1P36639 197 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 CCT8P50990 548 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TAS2R40P59535 323 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ARF5P84085 180 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 KIF19Q2TAC6 998 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ATP13A4Q4VNC1 1196 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 INO80DQ53TQ3 878 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 UNQ6494/PRO21346Q6UXR6 183 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 DAAM2Q86T65 1068 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ACRBPQ8NEB7 543 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 FAM71BQ8TC56 605 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 HMCESQ96FZ2 354 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 CALN1Q9BXU9 219 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 MAK16Q9BXY0 300 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SLC39A8Q9C0K1 460 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 NOL6Q9H6R4 1146 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 DYRK4Q9NR20 520 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SNX11Q9Y5W9 270 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ALG6Q9Y672 507 aa13.47□□□□□ -0.25
RAB11FIP3-207ENST00000461009 K7ERQ8 282 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 DFFAO00273 331 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 VILLO15195 856 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SMAD6O43541 496 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 BUB1BO60566 1050 aaPredicted RBP13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 MAGEC1O60732 1142 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 IGHV4-34P06331 123 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 KDELR1P24390 212 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 PAPOLAP51003 745 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 DNA2P51530 1060 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ARSEP51690 589 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ADPRHP54922 357 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SNRPD1P62314 119 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 RAD51Q06609 339 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 DPYSL3Q14195 570 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ANKRD20A8PQ5CZ79 823 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 C11orf63Q6NUN7 778 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 C22orf39Q6P5X5 142 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 VSIG1Q86XK7 387 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 LRRC49Q8IUZ0 686 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 LRRC8AQ8IWT6 810 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 AADATQ8N5Z0 425 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 TSC1Q92574 1164 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 CELF6Q96J87 481 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SERAC1Q96JX3 654 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 CAMK1GQ96NX5 476 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 ZNF670Q9BS34 389 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 IL21RQ9HBE5 538 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 SERGEFQ9UGK8 458 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 PCOLCE2Q9UKZ9 415 aa13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 FNDC3AQ9Y2H6 1198 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-207ENST00000461009 LRRD1A4D1F6 860 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZNF487B1APH4 448 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 YKT6O15498 198 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PSTPIP1O43586 416 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms