RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 MLXIPLQ9NP71 852 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 SEPT3Q9UH03 358 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 HCFC2Q9Y5Z7 792 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 MYO7AQ13402 2215 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 CCDC78A2IDD5 438 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 FAM47DPA6NHR8 397 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 KRT37O76014 449 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 MT-ND3P03897 115 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 AVPR1AP37288 418 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 SEC24CP53992 1094 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 CDH18Q13634 790 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 CCDC117Q8IWD4 279 aaPredicted RBP17.58■□□□□ 0.4
CDK11A-209ENST00000460465 SERAC1Q96JX3 654 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 KLF6Q99612 283 aaPredicted RBP17.58■□□□□ 0.4
CDK11A-209ENST00000460465 MGME1Q9BQP7 344 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 EPN3Q9H201 632 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 TASP1Q9H6P5 420 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 NKIRAS1Q9NYS0 192 aa17.58■□□□□ 0.4
CDK11A-209ENST00000460465 CHD7Q9P2D1 2997 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 TRIM49D1C9J1S8 452 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 GOLGA8RI6L899 631 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 SNRPAP09012 282 aaKnown RBP17.57■□□□□ 0.4
CDK11A-209ENST00000460465 GBP2P32456 591 aaPredicted RBP17.57■□□□□ 0.4
CDK11A-209ENST00000460465 ARF5P84085 180 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 NAB1Q13506 487 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 BMPR2Q13873 1038 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 FRG1Q14331 258 aaKnown RBP17.57■□□□□ 0.4
CDK11A-209ENST00000460465 RFTN1Q14699 578 aaPredicted RBP17.57■□□□□ 0.4
CDK11A-209ENST00000460465 LGSNQ5TDP6 509 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 ALG1LQ6GMV1 187 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 TPGS1Q6ZTW0 290 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 GRASPQ7Z6J2 395 aaPredicted RBP17.57■□□□□ 0.4
CDK11A-209ENST00000460465 PPHLN1Q8NEY8 458 aaKnown RBP17.57■□□□□ 0.4
CDK11A-209ENST00000460465 ZNF778Q96MU6 729 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 ARNT2Q9HBZ2 717 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 HAUS2Q9NVX0 235 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 ZDHHC7Q9NXF8 308 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 ZFATQ9P243 1243 aa17.57■□□□□ 0.4
CDK11A-209ENST00000460465 SMG5Q9UPR3 1016 aaKnown RBP17.57■□□□□ 0.4
CDK11A-209ENST00000460465 CCDC195A0A1B0GUA6 201 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 TYROBPO43914 113 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 SNAP91O60641 907 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 CSKP41240 450 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 SERPINB9P50453 376 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 PRSS36Q5K4E3 855 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 PKN3Q6P5Z2 889 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 ZNF449Q6P9G9 518 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 POTEHQ6S545 545 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 MFN1Q8IWA4 741 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 LEMD2Q8NC56 503 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 RIN3Q8TB24 985 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 PSKH2Q96QS6 385 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 FEM1AQ9BSK4 669 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 PRKD2Q9BZL6 878 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 SSU72Q9NP77 194 aaKnown RBP17.56■□□□□ 0.4
CDK11A-209ENST00000460465 PLK2Q9NYY3 685 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 TCAF1Q9Y4C2 921 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 SRRM3A6NNA2 597 aaPredicted RBP17.56■□□□□ 0.4
CDK11A-209ENST00000460465 KRT38O76015 456 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 RGRP47804 291 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 CYTH1Q15438 398 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 MPPE1Q53F39 396 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 LINGO4Q6UY18 593 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 PACS1Q6VY07 963 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 BCAS4Q8TDM0 211 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 DYDC1Q8WWB3 177 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 USP13Q92995 863 aaPredicted RBP17.56■□□□□ 0.4
CDK11A-209ENST00000460465 ZNF707Q96C28 371 aaPredicted RBP17.56■□□□□ 0.4
CDK11A-209ENST00000460465 VPS28Q9UK41 221 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 OR51B4Q9Y5P0 310 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 PSAT1Q9Y617 370 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 ANKRD36A6QL64 1941 aa17.56■□□□□ 0.4
CDK11A-209ENST00000460465 E2F8A0AVK6 867 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 ZMPSTE24O75844 475 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 CA4P22748 312 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 RPA3P35244 121 aaPredicted RBP17.55■□□□□ 0.4
CDK11A-209ENST00000460465 SLC1A5Q15758 541 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 GDAP1Q8TB36 358 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 EXOC2Q96KP1 924 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 C20orf96Q9NUD7 363 aaPredicted RBP17.55■□□□□ 0.4
CDK11A-209ENST00000460465 DPP7Q9UHL4 492 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 LOC285095A0A1B0GVY8 99 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 HMX2A2RU54 273 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 GMNCA6NCL1 334 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 CD160O95971 181 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 SERPINH1P50454 418 aaKnown RBP17.55■□□□□ 0.4
CDK11A-209ENST00000460465 SLC18A1P54219 525 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 SEPT6Q14141 434 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 SIRPB2Q5JXA9 342 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 MROH9Q5TGP6 573 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 TAX1BP1Q86VP1 789 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 KCNMB4Q86W47 210 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 BANPQ8N9N5 519 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 PTCD2Q8WV60 388 aaKnown RBP17.55■□□□□ 0.4
CDK11A-209ENST00000460465 MTBPQ96DY7 904 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 ALG14Q96F25 216 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 PBX4Q9BYU1 374 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 NKX2-4Q9H2Z4 354 aa17.55■□□□□ 0.4
CDK11A-209ENST00000460465 MRM3Q9HC36 420 aaKnown RBP17.55■□□□□ 0.4
CDK11A-209ENST00000460465 TDP1Q9NUW8 608 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms