RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 MAGEC1O60732 1142 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 TMCC1O94876 653 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 PCDH8O95206 1070 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 ERCC2P18074 760 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 PMLP29590 882 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 RHOAP61586 193 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 SLC18A3Q16572 532 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 ZNF423Q2M1K9 1284 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 KCNT1Q5JUK3 1230 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 DBX2Q6ZNG2 339 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 HORMAD1Q86X24 394 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 MFSD2AQ8NA29 543 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 DEF6Q9H4E7 631 aa23.36■■□□□ 1.33
PTPN4-208ENST00000460289 UBA2Q9UBT2 640 aaPredicted RBP23.36■■□□□ 1.33
PTPN4-208ENST00000460289 A0A1W2PQU0 124 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 SSU72P8A0A1W2PR75 194 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 TLR4O00206 839 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 WNT9AO14904 365 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 IGSF6O95976 241 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 WNT1P04628 370 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 ADRB3P13945 408 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 ARL4AP40617 200 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 CCT8P50990 548 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 OVGP1Q12889 678 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 DPYSL2Q16555 572 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 ZNF805Q5CZA5 627 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 IQCHQ86VS3 1027 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 LZTR1Q8N653 840 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 OR6K2Q8NGY2 324 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 SETD7Q8WTS6 366 aaKnown RBP23.35■■□□□ 1.33
PTPN4-208ENST00000460289 RAB7BQ96AH8 199 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 CELF6Q96J87 481 aaKnown RBP23.35■■□□□ 1.33
PTPN4-208ENST00000460289 FEM1CQ96JP0 617 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 SLC39A8Q9C0K1 460 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 CWC15Q9P013 229 aaKnown RBP23.35■■□□□ 1.33
PTPN4-208ENST00000460289 ANGPTL2Q9UKU9 493 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 NENFQ9UMX5 172 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 MFHAS1Q9Y4C4 1052 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 PCNX2A6NKB5 2137 aa23.35■■□□□ 1.33
PTPN4-208ENST00000460289 KNL1Q8NG31 2342 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 H0Y8X5 98 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 H3BRJ5 948 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 KCNK3O14649 394 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 FLRT2O43155 660 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 AP1G1O43747 822 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 IL1R2P27930 398 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 PAPOLAP51003 745 aaKnown RBP23.34■■□□□ 1.33
PTPN4-208ENST00000460289 SIM1P81133 766 aaPredicted RBP23.34■■□□□ 1.33
PTPN4-208ENST00000460289 MAPK8IP2Q13387 824 aaPredicted RBP23.34■■□□□ 1.33
PTPN4-208ENST00000460289 TRIP6Q15654 476 aaKnown RBP23.34■■□□□ 1.33
PTPN4-208ENST00000460289 ATXN7L2Q5T6C5 722 aaPredicted RBP23.34■■□□□ 1.33
PTPN4-208ENST00000460289 TEKT4Q8WW24 435 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 HSPH1Q92598 858 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 ARHGEF26Q96DR7 871 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 GDF3Q9NR23 364 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 LCMT1Q9UIC8 334 aa23.34■■□□□ 1.33
PTPN4-208ENST00000460289 C16orf96A6NNT2 1141 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 AKR1B10O60218 316 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 PCDHGA12O60330 932 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 PRAMEF11O60813 436 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 UGT2B4P06133 528 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 H2AFZP0C0S5 128 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 GKP32189 559 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 RPS21P63220 83 aaKnown RBP23.33■■□□□ 1.33
PTPN4-208ENST00000460289 DPYSQ14117 519 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 CYTH1Q15438 398 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 SMTNL2Q2TAL5 461 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 ASTE1Q2TB18 679 aaPredicted RBP23.33■■□□□ 1.33
PTPN4-208ENST00000460289 ZNF284Q2VY69 593 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 AFMIDQ63HM1 303 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 KIAA1161Q6NSJ0 714 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 GDPD4Q6W3E5 623 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 H2AFVQ71UI9 128 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 PARS2Q7L3T8 475 aaKnown RBP23.33■■□□□ 1.33
PTPN4-208ENST00000460289 ZSCAN30Q86W11 494 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 ZNF564Q8TBZ8 553 aaPredicted RBP23.33■■□□□ 1.33
PTPN4-208ENST00000460289 CTNNBL1Q8WYA6 563 aaPredicted RBP23.33■■□□□ 1.33
PTPN4-208ENST00000460289 BTBD6Q96KE9 485 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 CAMK1GQ96NX5 476 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 ELF4Q99607 663 aaPredicted RBP23.33■■□□□ 1.33
PTPN4-208ENST00000460289 PDFQ9HBH1 243 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 ABHD10Q9NUJ1 306 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.33■■□□□ 1.33
PTPN4-208ENST00000460289 CTTNBP2NLQ9P2B4 639 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 UVRAGQ9P2Y5 699 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 PCOLCE2Q9UKZ9 415 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 FADS3Q9Y5Q0 445 aa23.33■■□□□ 1.33
PTPN4-208ENST00000460289 PLXNA2O75051 1894 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 A0A1B0GTQ1 180 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 SPAARA0A1B0GVQ0 90 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 J3KR12 359 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 SLC31A1O15431 190 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 RARAP10276 462 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 TCF4P15884 667 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 NXPH1P58417 271 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 SHC2P98077 582 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 GRM3Q14832 879 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 HADHQ16836 314 aaKnown RBP23.32■■□□□ 1.32
PTPN4-208ENST00000460289 POLNQ7Z5Q5 900 aa23.32■■□□□ 1.32
PTPN4-208ENST00000460289 RHBDD1Q8TEB9 315 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms