RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TMCC1O94876 653 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 ADRB3P13945 408 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 HCAR3P49019 387 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 FAM193AP78312 1265 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 OVGP1Q12889 678 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 FOXC1Q12948 553 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 TRIM14Q14142 442 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 PIGHQ14442 188 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-203ENST00000459756 STAT4Q14765 748 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 MYLK3Q32MK0 819 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 ZNF805Q5CZA5 627 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-203ENST00000459756 SPECC1LQ69YQ0 1117 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 ALKBH5Q6P6C2 394 aaKnown RBP16.38■□□□□ 0.21
COL7A1-203ENST00000459756 FBXL19Q6PCT2 694 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 RFX8Q6ZV50 586 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 HORMAD1Q86X24 394 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 GDAP1L1Q96MZ0 367 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 KCTD15Q96SI1 283 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-203ENST00000459756 KLC2Q9H0B6 622 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 THAP2Q9H0W7 228 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 LRRC19Q9H756 370 aa16.38■□□□□ 0.21
COL7A1-203ENST00000459756 CHD8Q9HCK8 2581 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 TPRP12270 2363 aaKnown RBP16.37■□□□□ 0.21
COL7A1-203ENST00000459756 A0A1B0GTQ1 180 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 AP1G1O43747 822 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 PCDH8O95206 1070 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 TRIM16O95361 564 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 CYP1A2P05177 515 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 NXPH1P58417 271 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 RAD51Q06609 339 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 ZNF284Q2VY69 593 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 INAVAQ3KP66 663 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 BOLA3Q53S33 107 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 CCDC122Q5T0U0 273 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 ATXN7L2Q5T6C5 722 aaPredicted RBP16.37■□□□□ 0.21
COL7A1-203ENST00000459756 GLRX5Q86SX6 157 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 ZSCAN30Q86W11 494 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 NIPA2Q8N8Q9 360 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 OR6K2Q8NGY2 324 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 RAB7BQ96AH8 199 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 CNTNAP3BQ96NU0 1288 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 ELF4Q99607 663 aaPredicted RBP16.37■□□□□ 0.21
COL7A1-203ENST00000459756 CDC6Q99741 560 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 CNTNAP3Q9BZ76 1288 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 ERVMER34-1Q9H9K5 563 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 IP6K2Q9UHH9 426 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 WASF3Q9UPY6 502 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 FADS3Q9Y5Q0 445 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 CEP295Q9C0D2 2601 aa16.37■□□□□ 0.21
COL7A1-203ENST00000459756 DOCK9Q9BZ29 2069 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 ARHGAP42A6NI28 874 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 YKT6O15498 198 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 PRAMEF11O60813 436 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 IGSF6O95976 241 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 ERCC2P18074 760 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 GKP32189 559 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 GRK6P43250 576 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 ARRB1P49407 418 aaPredicted RBP16.36■□□□□ 0.21
COL7A1-203ENST00000459756 RHOAP61586 193 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 RPS21P63220 83 aaKnown RBP16.36■□□□□ 0.21
COL7A1-203ENST00000459756 DPYSL2Q16555 572 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 TMEM259Q4ZIN3 620 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 AFMIDQ63HM1 303 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 KIAA1161Q6NSJ0 714 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 PARS2Q7L3T8 475 aaKnown RBP16.36■□□□□ 0.21
COL7A1-203ENST00000459756 OXR1Q8N573 874 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 TMEM145Q8NBT3 493 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 OR8K1Q8NGG5 319 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 BAHD1Q8TBE0 780 aaPredicted RBP16.36■□□□□ 0.21
COL7A1-203ENST00000459756 RHBDD1Q8TEB9 315 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 CELF6Q96J87 481 aaKnown RBP16.36■□□□□ 0.21
COL7A1-203ENST00000459756 FEM1CQ96JP0 617 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 DNAJC7Q99615 494 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 NUP85Q9BW27 656 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 ZWILCHQ9H900 591 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 UBA2Q9UBT2 640 aaPredicted RBP16.36■□□□□ 0.21
COL7A1-203ENST00000459756 ANAPC7Q9UJX3 599 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 MFHAS1Q9Y4C4 1052 aa16.36■□□□□ 0.21
COL7A1-203ENST00000459756 C16orf96A6NNT2 1141 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 H3BRJ5 948 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 SLC31A1O15431 190 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 TSPAN6O43657 245 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 UGT2B4P06133 528 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 TPM1P09493 284 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 PRLRP16471 622 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 HNRNPA2B1P22626 353 aaKnown RBP16.35■□□□□ 0.21
COL7A1-203ENST00000459756 AKT2P31751 481 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
COL7A1-203ENST00000459756 PAPOLAP51003 745 aaKnown RBP16.35■□□□□ 0.21
COL7A1-203ENST00000459756 DPYSQ14117 519 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 SEL1L3Q68CR1 1132 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 GDPD4Q6W3E5 623 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 LZTR1Q8N653 840 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 TEKT4Q8WW24 435 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 KLK6Q92876 244 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 VOPP1Q96AW1 172 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 ARHGEF26Q96DR7 871 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 CPEB1Q9BZB8 566 aaKnown RBP16.35■□□□□ 0.21
COL7A1-203ENST00000459756 SLC39A8Q9C0K1 460 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms