RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MAPK8P45983 427 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 ID4P47928 161 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 CSNK1DP48730 415 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 NEK3P51956 506 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 NSUN2Q08J23 767 aaKnown RBP eCLIP16.4■□□□□ 0.22
CD28-203ENST00000458610 DPYSL3Q14195 570 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 CYTH1Q15438 398 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 RSPO4Q2I0M5 234 aaPredicted RBP16.4■□□□□ 0.22
CD28-203ENST00000458610 POM121L1PQ3SYA9 428 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 SLC45A4Q5BKX6 768 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 ANKRD20A8PQ5CZ79 823 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 ZNF805Q5CZA5 627 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 ZSCAN30Q86W11 494 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 ARHGAP12Q8IWW6 846 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 NPWQ8N729 165 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 HCAR2Q8TDS4 363 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 EDEM2Q9BV94 578 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 CINPQ9BW66 212 aaPredicted RBP16.4■□□□□ 0.22
CD28-203ENST00000458610 CPEB1Q9BZB8 566 aaKnown RBP16.4■□□□□ 0.22
CD28-203ENST00000458610 PDFQ9HBH1 243 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 TMEM9BQ9NQ34 198 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 SEPT3Q9UH03 358 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
CD28-203ENST00000458610 ATXN2Q99700 1313 aaKnown RBP16.4■□□□□ 0.22
CD28-203ENST00000458610 A0A1W2PPC4 97 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 LRRD1A4D1F6 860 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 PATE3B3GLJ2 98 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 ARHGAP33O14559 1287 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 SLC30A4O14863 429 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 ZFXP17010 805 aaPredicted RBP16.39■□□□□ 0.21
CD28-203ENST00000458610 COMTP21964 271 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 SUOXP51687 545 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 AFF3P51826 1226 aaKnown RBP16.39■□□□□ 0.21
CD28-203ENST00000458610 NAP1L1P55209 391 aaKnown RBP16.39■□□□□ 0.21
CD28-203ENST00000458610 IFI16Q16666 785 aaKnown RBP16.39■□□□□ 0.21
CD28-203ENST00000458610 STPG1Q5TH74 334 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 AGBL4Q5VU57 503 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 TCEAL6Q6IPX3 200 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 IL27RAQ6UWB1 636 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 GDPD4Q6W3E5 623 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 KIAA1328Q86T90 577 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 TRIM69Q86WT6 500 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 ZCCHC9Q8N567 271 aaKnown RBP16.39■□□□□ 0.21
CD28-203ENST00000458610 ATPAF2Q8N5M1 289 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.39■□□□□ 0.21
CD28-203ENST00000458610 TCEAL3Q969E4 200 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 ARRDC3Q96B67 414 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 CAPN10Q9HC96 672 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 DMTF1Q9Y222 760 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 ALG6Q9Y672 507 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 GVINP1Q7Z2Y8 2422 aa16.39■□□□□ 0.21
CD28-203ENST00000458610 LNP1A1A4G5 178 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 BTNL10A8MVZ5 291 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 PLK4O00444 970 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 IGHV4-34P06331 123 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 ENGP17813 658 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 MX2P20592 715 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 RACK1P63244 317 aaKnown RBP16.38■□□□□ 0.21
CD28-203ENST00000458610 MMRN1Q13201 1228 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 LBRQ14739 615 aaKnown RBP16.38■□□□□ 0.21
CD28-203ENST00000458610 PAFAH1B3Q15102 231 aaKnown RBP16.38■□□□□ 0.21
CD28-203ENST00000458610 ATXN7L2Q5T6C5 722 aaPredicted RBP16.38■□□□□ 0.21
CD28-203ENST00000458610 PIP5KL1Q5T9C9 394 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 TIGD7Q6NT04 549 aaPredicted RBP16.38■□□□□ 0.21
CD28-203ENST00000458610 C11orf63Q6NUN7 778 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 PCDH19Q8TAB3 1148 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 FAF2Q96CS3 445 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 FEM1CQ96JP0 617 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 ZNF641Q96N77 438 aaPredicted RBP16.38■□□□□ 0.21
CD28-203ENST00000458610 ZNF830Q96NB3 372 aaPredicted RBP16.38■□□□□ 0.21
CD28-203ENST00000458610 RNF157Q96PX1 679 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 TUBGCP5Q96RT8 1024 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 ETNK2Q9NVF9 386 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 DLL3Q9NYJ7 618 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 DKK3Q9UBP4 350 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 LHX3Q9UBR4 397 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 RALGAPA1Q6GYQ0 2036 aa16.38■□□□□ 0.21
CD28-203ENST00000458610 C16orf96A6NNT2 1141 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 LATO43561 262 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 PSTPIP1O43586 416 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 TSPAN6O43657 245 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 AP1G1O43747 822 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 GDF9O60383 454 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 BUB1BO60566 1050 aaPredicted RBP16.37■□□□□ 0.21
CD28-203ENST00000458610 RNGTTO60942 597 aaKnown RBP16.37■□□□□ 0.21
CD28-203ENST00000458610 PCDH8O95206 1070 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 KRT1P04264 644 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 UGT2B4P06133 528 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 CD48P09326 243 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 ADRB3P13945 408 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 XPAP23025 273 aaPredicted RBP16.37■□□□□ 0.21
CD28-203ENST00000458610 GRIA4P48058 902 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 VAV2P52735 878 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 METAP1P53582 386 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 KIF5AQ12840 1032 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 ZNF235Q14590 738 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 SETMARQ53H47 684 aaPredicted RBP16.37■□□□□ 0.21
CD28-203ENST00000458610 CFAP58Q5T655 872 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 MARC1Q5VT66 337 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms