RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ETNK2Q9NVF9 386 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 ANKRD36A6QL64 1941 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 A0A1W2PPC4 97 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 MED19A0JLT2 244 aaPredicted RBP18.98■□□□□ 0.63
USP39-209ENST00000458268 KCNK3O14649 394 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 SLC7A4O43246 635 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 PROSCO94903 275 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 C7P10643 843 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 PRLRP16471 622 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 NOVA1P51513 510 aaKnown RBP18.98■□□□□ 0.63
USP39-209ENST00000458268 RAD51Q06609 339 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 CCDC15Q0P6D6 951 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 DPYSQ14117 519 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 DPYSL2Q16555 572 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 PSAPL1Q6NUJ1 521 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 TMCO3Q6UWJ1 677 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 PARS2Q7L3T8 475 aaKnown RBP18.98■□□□□ 0.63
USP39-209ENST00000458268 SLC35G2Q8TBE7 412 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 ISG20Q96AZ6 181 aaKnown RBP18.98■□□□□ 0.63
USP39-209ENST00000458268 KLHL32Q96NJ5 620 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 CSPG4P5Q96PW8 444 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 GAREM1Q9H706 876 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 IL21RQ9HBE5 538 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 SNX11Q9Y5W9 270 aa18.98■□□□□ 0.63
USP39-209ENST00000458268 CACNA1EQ15878 2313 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 A0A1W2PQU0 124 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 NEMP1O14524 444 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 SLC31A1O15431 190 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 PRAMEF11O60813 436 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 PALMO75781 387 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 CD48P09326 243 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 CCR5P51681 352 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 ZNF135P52742 658 aaPredicted RBP18.97■□□□□ 0.63
USP39-209ENST00000458268 TAS2R38P59533 333 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 TAS2R40P59535 323 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 CYTH1Q15438 398 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 KIF19Q2TAC6 998 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 MYLK3Q32MK0 819 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 ERMP1Q7Z2K6 904 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 POLNQ7Z5Q5 900 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 ARHGAP12Q8IWW6 846 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 KCTD6Q8NC69 237 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 TEKT4Q8WW24 435 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 CINPQ9BW66 212 aaPredicted RBP18.97■□□□□ 0.63
USP39-209ENST00000458268 FZD3Q9NPG1 666 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 LHX3Q9UBR4 397 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 CA5BQ9Y2D0 317 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 ANKRD6Q9Y2G4 727 aa18.97■□□□□ 0.63
USP39-209ENST00000458268 SPTBN2O15020 2390 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 C16orf96A6NNT2 1141 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 WNT9AO14904 365 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 GIPC1O14908 333 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 INSIG1O15503 277 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 PIGNO95427 931 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 POP4O95707 220 aaKnown RBP18.96■□□□□ 0.63
USP39-209ENST00000458268 CER1O95813 267 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 ADRB3P13945 408 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 XPAP23025 273 aaPredicted RBP18.96■□□□□ 0.63
USP39-209ENST00000458268 ITGB7P26010 798 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 HCAR3P49019 387 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 RACK1P63244 317 aaKnown RBP18.96■□□□□ 0.63
USP39-209ENST00000458268 IL9RQ01113 521 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 BNC1Q01954 994 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 HLA-BQ31612 363 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 SETMARQ53H47 684 aaPredicted RBP18.96■□□□□ 0.63
USP39-209ENST00000458268 PRAMEF14Q5SWL7 426 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 CFAP58Q5T655 872 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 C1orf216Q8TAB5 229 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 CASKIN2Q8WXE0 1202 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 MRFAP1L1Q96HT8 127 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 ANP32EQ9BTT0 268 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 PREBQ9HCU5 417 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 IPO11Q9UI26 975 aaKnown RBP18.96■□□□□ 0.63
USP39-209ENST00000458268 ITM2BQ9Y287 266 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 HYOU1Q9Y4L1 999 aa18.96■□□□□ 0.63
USP39-209ENST00000458268 TRPM6Q9BX84 2022 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 KCNK5O95279 499 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 MAP3K6O95382 1288 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 CD38P28907 300 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 MAGEA1P43355 309 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 NOP2P46087 812 aaKnown RBP18.95■□□□□ 0.62
USP39-209ENST00000458268 GRIA4P48058 902 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 INO80DQ53TQ3 878 aaPredicted RBP18.95■□□□□ 0.62
USP39-209ENST00000458268 SLC45A4Q5BKX6 768 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 ZNF805Q5CZA5 627 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 SEL1L3Q68CR1 1132 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 NAPEPLDQ6IQ20 393 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 GDPD4Q6W3E5 623 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 ATPAF2Q8N5M1 289 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 SPC24Q8NBT2 197 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 ORAI3Q9BRQ5 295 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 HDAC8Q9BY41 377 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 ZDHHC5Q9C0B5 715 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 KDM4CQ9H3R0 1056 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 PDFQ9HBH1 243 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 GGT7Q9UJ14 662 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 TFR2Q9UP52 801 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 FNDC3AQ9Y2H6 1198 aaKnown RBP18.95■□□□□ 0.62
USP39-209ENST00000458268 LAMA1P25391 3075 aa18.95■□□□□ 0.62
USP39-209ENST00000458268 WNT1P04628 370 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms