RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TLE3Q04726 772 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 POLD3Q15054 466 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-220ENST00000458038 TAF3Q5VWG9 929 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 DENND6BQ8NEG7 585 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 TPCN2Q8NHX9 752 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 BTN2A2Q8WVV5 523 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 OSBPL2Q9H1P3 480 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 MAGEH1Q9H213 219 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 CFAP46Q8IYW2 2715 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 ATMQ13315 3056 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 PES1O00541 588 aaKnown RBP21.9■■□□□ 1.1
CPNE1-220ENST00000458038 TPP1O14773 563 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 ADRA1BP35368 520 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 NOMO3P69849 1222 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 CCDC173Q0VFZ6 552 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 FGL2Q14314 439 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 ZNF805Q5CZA5 627 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 CT47A1Q5JQC4 288 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-220ENST00000458038 BROXQ5VW32 411 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 SPACA3Q8IXA5 215 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 DRC7Q8IY82 874 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 ZNF548Q8NEK5 533 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-220ENST00000458038 CPA5Q8WXQ8 436 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 LGMNQ99538 433 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 OSBPL1AQ9BXW6 950 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 ZDHHC6Q9H6R6 413 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 POLR1BQ9H9Y6 1135 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 SALL4Q9UJQ4 1053 aa21.9■■□□□ 1.1
CPNE1-220ENST00000458038 LY6G6EA0A0G2JKS1 128 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 CAPN8A6NHC0 703 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 C16orf96A6NNT2 1141 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 NEMP1O14524 444 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 POP4O95707 220 aaKnown RBP21.89■■□□□ 1.09
CPNE1-220ENST00000458038 GSRP00390 522 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 RHOQP17081 205 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 SNRPD1P62314 119 aaKnown RBP21.89■■□□□ 1.09
CPNE1-220ENST00000458038 TRNP1Q6NT89 227 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 PARS2Q7L3T8 475 aaKnown RBP21.89■■□□□ 1.09
CPNE1-220ENST00000458038 NOP9Q86U38 636 aaKnown RBP21.89■■□□□ 1.09
CPNE1-220ENST00000458038 MAPK15Q8TD08 544 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 EPS8L1Q8TE68 723 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 HIC2Q96JB3 615 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 KLF6Q99612 283 aaPredicted RBP21.89■■□□□ 1.09
CPNE1-220ENST00000458038 FCF1Q9Y324 198 aaKnown RBP21.89■■□□□ 1.09
CPNE1-220ENST00000458038 PCDHB1Q9Y5F3 818 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 U3KQA8 63 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 RP1P56715 2156 aa21.89■■□□□ 1.09
CPNE1-220ENST00000458038 FLNBO75369 2602 aaKnown RBP21.89■■□□□ 1.09
CPNE1-220ENST00000458038 ZSCAN5CA6NGD5 496 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-220ENST00000458038 IGLON5A6NGN9 336 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 F8VZ95 297 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 TOR1BO14657 336 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 AQP9O43315 295 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 USP12O75317 370 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 CSO75390 466 aaKnown RBP21.88■■□□□ 1.09
CPNE1-220ENST00000458038 CD160O95971 181 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 SDC4P31431 198 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 GABREP78334 506 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 ATP11AP98196 1134 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 PTK2BQ14289 1009 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 C2CD6Q53TS8 623 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 ZNF542PQ5EBM4 170 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 MANEALQ5VSG8 457 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 NAA35Q5VZE5 725 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 STRADAQ7RTN6 431 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 OR2AP1Q8NGE2 309 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 IFI44Q8TCB0 444 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 ARHGEF2Q92974 986 aaKnown RBP21.88■■□□□ 1.09
CPNE1-220ENST00000458038 GLMNQ92990 594 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 TBATAQ96M53 351 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 TM6SF2Q9BZW4 377 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 TMEM248Q9NWD8 314 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 GTF3C3Q9Y5Q9 886 aa21.88■■□□□ 1.09
CPNE1-220ENST00000458038 RAD51BO15315 384 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 NEBLO76041 1014 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 MMEP08473 750 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 JUNDP17535 347 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 MMP8P22894 467 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 EEF1GP26641 437 aaKnown RBP21.87■■□□□ 1.09
CPNE1-220ENST00000458038 PTPN9P43378 593 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 PDE1CQ14123 709 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-220ENST00000458038 RWDD4Q6NW29 188 aaKnown RBP21.87■■□□□ 1.09
CPNE1-220ENST00000458038 IGF2-ASQ6U949 168 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 NLRP14Q86W24 1093 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 RYBPQ8N488 228 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-220ENST00000458038 WDR48Q8TAF3 677 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 IL12RB2Q99665 862 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 C1QTNF7Q9BXJ2 289 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 DPH1Q9BZG8 443 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 CLSTN2Q9H4D0 955 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 METTL5Q9NRN9 209 aaKnown RBP21.87■■□□□ 1.09
CPNE1-220ENST00000458038 THSD1Q9NS62 852 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 SPASTQ9UBP0 616 aa21.87■■□□□ 1.09
CPNE1-220ENST00000458038 COL6A6A6NMZ7 2263 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 MPOP05164 745 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 ACVRL1P37023 503 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 RPIAP49247 311 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 PFN3P60673 137 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 YPEL5P62699 121 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 CDR2Q01850 454 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms