RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PET117Q6UWS5 81 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ISLR2Q6UXK2 745 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 KDM7AQ6ZMT4 941 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CCDC121Q6ZUS5 278 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 MARK2Q7KZI7 788 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 KRT28Q7Z3Y7 464 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 RABEPKQ7Z6M1 372 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CHD1LQ86WJ1 897 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 METTL23Q86XA0 190 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CPOQ8IVL8 374 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 GRAMD1CQ8IYS0 662 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 SYCE1Q8N0S2 351 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 TAGAPQ8N103 731 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CELF5Q8N6W0 485 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 CNNM3Q8NE01 707 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PPP1R35Q8TAP8 253 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 GANCQ8TET4 914 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 TSPEARQ8WU66 669 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 MAIP1Q8WWC4 291 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 STARD8Q92502 1023 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 IP6K1Q92551 441 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 SEPT8Q92599 483 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 RILPL2Q969X0 211 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZNF764Q96H86 408 aaPredicted RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 CAMK1GQ96NX5 476 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 DMRTA2Q96SC8 542 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZFYVE21Q9BQ24 234 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 NUP85Q9BW27 656 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZNF341Q9BYN7 854 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PUS3Q9BZE2 481 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 KATNBL1Q9H079 304 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PCED1AQ9H1Q7 454 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ABCG8Q9H221 673 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 KCNH6Q9H252 994 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 HSD3B7Q9H2F3 369 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 TMEM60Q9H2L4 133 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 EPS8L2Q9H6S3 715 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 C12orf10Q9HB07 376 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 DDX28Q9NUL7 540 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 NUDT15Q9NV35 164 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 SLC39A10Q9ULF5 831 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PADI4Q9UM07 663 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZFR2Q9UPR6 939 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 CORO2BQ9UQ03 480 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CHMP2BQ9UQN3 213 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ERVK-19Q9WJR5 959 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 DMRT1Q9Y5R6 373 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PLEKHG2Q9H7P9 1386 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CCDC171Q6TFL3 1326 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 CYP3A7-CYP3A51PA0A087WV96 503 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ERICH2A1L162 156 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 CCDC151A5D8V7 595 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 GOLGA8IPA6NC78 632 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 TRIM43BA6NCK2 446 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 GOLGA8RI6L899 631 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 OVOL3O00110 214 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 HNRNPRO43390 633 aaKnown RBP5.54□□□□□ -1.52
VPS41-209ENST00000457055 TBC1D4O60343 1298 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 CACNG3O60359 315 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 CYTIPO60759 359 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 TBX10O75333 385 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 GJB3O75712 270 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 TUSC2O75896 110 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 TMEM63AO94886 807 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 SCAF4O95104 1147 aaKnown RBP5.54□□□□□ -1.52
VPS41-209ENST00000457055 IL18BPO95998 194 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 LMNAP02545 664 aaKnown RBP5.54□□□□□ -1.52
VPS41-209ENST00000457055 OPN1LWP04000 364 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ASLP04424 464 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 URODP06132 367 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 GLAP06280 429 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 FESP07332 822 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ANXA6P08133 673 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ASNSP08243 561 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 PRR35P0CG20 571 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 TXNP10599 105 aaKnown RBP5.54□□□□□ -1.52
VPS41-209ENST00000457055 POU2F1P14859 743 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 TYMPP19971 482 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 CYP3A7P24462 503 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ADCY8P40145 1251 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 STARP49675 285 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 THOP1P52888 689 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 PPP5CP53041 499 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 EIF3EP60228 445 aaKnown RBP5.54□□□□□ -1.52
VPS41-209ENST00000457055 S100A12P80511 92 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ARHGAP8P85298 464 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ATP8B2P98198 1209 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ROR2Q01974 943 aaKnown RBP5.54□□□□□ -1.52
VPS41-209ENST00000457055 DSC2Q02487 901 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 GFPT1Q06210 699 aaPredicted RBP5.54□□□□□ -1.52
VPS41-209ENST00000457055 KLF10Q13118 480 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 RAPSNQ13702 412 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 SPCS2Q15005 226 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 PRKD1Q15139 912 aaPredicted RBP5.54□□□□□ -1.52
VPS41-209ENST00000457055 NTRK3Q16288 839 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 BCL2A1Q16548 175 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 KYNUQ16719 465 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 UGP2Q16851 508 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 ATAT1Q5SQI0 421 aa5.54□□□□□ -1.52
VPS41-209ENST00000457055 VWA5B1Q5TIE3 1220 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms