RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 WASF2Q9Y6W5 498 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 MAGEC1O60732 1142 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 PRAMEF11O60813 436 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 PALMO75781 387 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 IPO7O95373 1038 aaKnown RBP23.54■■□□□ 1.36
CBX3-204ENST00000456948 CYLC1P35663 651 aaPredicted RBP23.54■■□□□ 1.36
CBX3-204ENST00000456948 CSNK1EP49674 416 aaKnown RBP23.54■■□□□ 1.36
CBX3-204ENST00000456948 SLC25A11Q02978 314 aaKnown RBP23.54■■□□□ 1.36
CBX3-204ENST00000456948 GRIK2Q13002 908 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 SLC14A1Q13336 389 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 DPYSQ14117 519 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 RFTN1Q14699 578 aaPredicted RBP23.54■■□□□ 1.36
CBX3-204ENST00000456948 PDK2Q15119 407 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 PPM1JQ5JR12 505 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 TMCO4Q5TGY1 634 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 ZSCAN30Q86W11 494 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 TRIM69Q86WT6 500 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 TC2NQ8N9U0 490 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 NSMCE1Q8WV22 266 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 RAB7BQ96AH8 199 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 CSPG4P5Q96PW8 444 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 AASDHPPTQ9NRN7 309 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 ACTL7AQ9Y615 435 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 CACNA1AO00555 2505 aa23.54■■□□□ 1.36
CBX3-204ENST00000456948 PLK4O00444 970 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 PCDH8O95206 1070 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 METAP1P53582 386 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 IL10RBQ08334 325 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 MESDQ14696 234 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 ODF2Q5BJF6 829 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 ZNF805Q5CZA5 627 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 PIP5KL1Q5T9C9 394 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 BBS5Q8N3I7 341 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 RFFLQ8WZ73 363 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 ARRDC3Q96B67 414 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 FEM1CQ96JP0 617 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 SERAC1Q96JX3 654 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 PANX2Q96RD6 677 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 PCDH18Q9HCL0 1135 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 DNAAF2Q9NVR5 837 aaKnown RBP23.53■■□□□ 1.36
CBX3-204ENST00000456948 MFHAS1Q9Y4C4 1052 aa23.53■■□□□ 1.36
CBX3-204ENST00000456948 LAMA1P25391 3075 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 TM4SF5O14894 197 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 LATO43561 262 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 DFNA5O60443 496 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 RNGTTO60942 597 aaKnown RBP23.52■■□□□ 1.36
CBX3-204ENST00000456948 TCF4P15884 667 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 AMPD1P23109 780 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 MAGEA1P43355 309 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 RENBPP51606 427 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 STAT4Q14765 748 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 AFMIDQ63HM1 303 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 GDPD4Q6W3E5 623 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 LRRC49Q8IUZ0 686 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 CINPQ9BW66 212 aaPredicted RBP23.52■■□□□ 1.36
CBX3-204ENST00000456948 CALN1Q9BXU9 219 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 KLC2Q9H0B6 622 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 FSCN3Q9NQT6 498 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 IPO11Q9UI26 975 aaKnown RBP23.52■■□□□ 1.36
CBX3-204ENST00000456948 ANKRD6Q9Y2G4 727 aa23.52■■□□□ 1.36
CBX3-204ENST00000456948 A0A1B0GVT2 93 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 TMEM110-MUSTN1A8MSY1 372 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 J3KR12 359 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 NEMP1O14524 444 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 ADRB3P13945 408 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 CSRP1P21291 193 aaKnown RBP23.51■■□□□ 1.35
CBX3-204ENST00000456948 CD38P28907 300 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 GJC1P36383 396 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 SUZ12Q15022 739 aaKnown RBP23.51■■□□□ 1.35
CBX3-204ENST00000456948 CFAP58Q5T655 872 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 ATXN7L2Q5T6C5 722 aaPredicted RBP23.51■■□□□ 1.35
CBX3-204ENST00000456948 NAPEPLDQ6IQ20 393 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 TMTC1Q8IUR5 882 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 OR6K2Q8NGY2 324 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 ZNF599Q96NL3 588 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 CPEB1Q9BZB8 566 aaKnown RBP23.51■■□□□ 1.35
CBX3-204ENST00000456948 GAREM1Q9H706 876 aa23.51■■□□□ 1.35
CBX3-204ENST00000456948 CNOT1A5YKK6 2376 aaKnown RBP23.51■■□□□ 1.35
CBX3-204ENST00000456948 GOLGA6L6A8MZA4 724 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 UPK3BL1B0FP48 263 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 UPK3BL2E5RIL1 263 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 PRAMEF26H0Y7S4 382 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 VILLO15195 856 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 AP1G1O43747 822 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 MTA2O94776 668 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 UGT2B4P06133 528 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 ZNF883P0CG24 379 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 XPAP23025 273 aaPredicted RBP23.5■■□□□ 1.35
CBX3-204ENST00000456948 MAT2AP31153 395 aaKnown RBP23.5■■□□□ 1.35
CBX3-204ENST00000456948 SLC1A1P43005 524 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 SUOXP51687 545 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 RPS21P63220 83 aaKnown RBP23.5■■□□□ 1.35
CBX3-204ENST00000456948 OVGP1Q12889 678 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 HNRNPDQ14103 355 aaKnown RBP23.5■■□□□ 1.35
CBX3-204ENST00000456948 CYTH1Q15438 398 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 KIAA1161Q6NSJ0 714 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 HORMAD1Q86X24 394 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 ARHGAP12Q8IWW6 846 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 HCAR2Q8TDS4 363 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 PDFQ9HBH1 243 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms