RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PDK1Q15118 436 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 SLC5A9Q2M3M2 681 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 MAP3K21Q5TCX8 1036 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 LRRC8BQ6P9F7 803 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 UGT2A3Q6UWM9 527 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 RPS27LQ71UM5 84 aaKnown RBP12.6□□□□□ -0.39
LINC00959-201ENST00000456581 METTL23Q86XA0 190 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 TDRD5Q8NAT2 981 aaKnown RBP12.6□□□□□ -0.39
LINC00959-201ENST00000456581 FAM110BQ8TC76 370 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 NAT14Q8WUY8 206 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 CDKL2Q92772 493 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 RNF34Q969K3 372 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 MPP4Q96JB8 637 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 CATSPER2Q96P56 530 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 WDCPQ9H6R7 721 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 ABI2Q9NYB9 513 aaPredicted RBP12.6□□□□□ -0.39
LINC00959-201ENST00000456581 GMPR2Q9P2T1 348 aaKnown RBP12.6□□□□□ -0.39
LINC00959-201ENST00000456581 TBC1D30Q9Y2I9 924 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 PTCH2Q9Y6C5 1203 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 C15orf38-AP3S2A0A0A6YYH1 394 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 ZNF487B1APH4 448 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 C9IYK1 514 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 M0QZQ0 153 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 VILLO15195 856 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 HNRNPRO43390 633 aaKnown RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 LRIG2O94898 1065 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 TFAP2AP05549 437 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 TPI1P60174 286 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 SLC39A12Q504Y0 691 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 C6orf52Q5T4I8 152 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 ARPINQ7Z6K5 226 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 SPATA24Q86W54 205 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 ZSCAN18Q8TBC5 510 aaPredicted RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 DQX1Q8TE96 717 aaKnown RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 CNBD2Q96M20 576 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 CDRT15Q96T59 188 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 GRIP2Q9C0E4 1043 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 SUDS3Q9H7L9 328 aaPredicted RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 COPS7BQ9H9Q2 264 aaPredicted RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 OR12D3Q9UGF7 316 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 DCDC2Q9UHG0 476 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 A0A1W2PQ45 241 aaPredicted RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 A0A1W2PQY0 241 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 FBXO21O94952 628 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 INHAP05111 366 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 ENO3P13929 434 aaPredicted RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 HDCP19113 662 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 GRK4P32298 578 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 GRIK1P39086 918 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 SEMA3BQ13214 749 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 DDR2Q16832 855 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 LHX8Q68G74 356 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 NXNQ6DKJ4 435 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 RBM44Q6ZP01 1051 aaKnown RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 ARHGAP22Q7Z5H3 698 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 RAB3IL1Q8TBN0 382 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 RCN3Q96D15 328 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 SGF29Q96ES7 293 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 OMDQ99983 421 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 GATA5Q9BWX5 397 aaPredicted RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 CDH19Q9H159 772 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 DMAP1Q9NPF5 467 aaPredicted RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 DNAJC28Q9NX36 388 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 KLHL8Q9P2G9 620 aaPredicted RBP12.59□□□□□ -0.39
LINC00959-201ENST00000456581 CASP8AP2Q9UKL3 1982 aa12.59□□□□□ -0.39
LINC00959-201ENST00000456581 CCDC160A6NGH7 325 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 PMLP29590 882 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 ALDH1A3P47895 512 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 SLC5A3P53794 718 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 YWHAHQ04917 246 aaPredicted RBP12.58□□□□□ -0.4
LINC00959-201ENST00000456581 HNRNPDQ14103 355 aaKnown RBP12.58□□□□□ -0.4
LINC00959-201ENST00000456581 TBCCQ15814 346 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 PDCD2Q16342 344 aaPredicted RBP12.58□□□□□ -0.4
LINC00959-201ENST00000456581 DEFB115Q30KQ5 88 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 ZNF280DQ6N043 979 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 EPGNQ6UW88 154 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 ARHGAP36Q6ZRI8 547 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 KBTBD6Q86V97 674 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 ST13P4Q8IZP2 240 aaPredicted RBP12.58□□□□□ -0.4
LINC00959-201ENST00000456581 CMTM5Q96DZ9 223 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 DCUN1D1Q96GG9 259 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 SUSD3Q96L08 255 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 ZNF512Q96ME7 567 aaPredicted RBP12.58□□□□□ -0.4
LINC00959-201ENST00000456581 NMUR1Q9HB89 426 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 IARS2Q9NSE4 1012 aaKnown RBP12.58□□□□□ -0.4
LINC00959-201ENST00000456581 SLC39A10Q9ULF5 831 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 PTPRDP23468 1912 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 NT5C1B-RDH14C9J2C7 533 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 CYP11A1P05108 521 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 C2P06681 752 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 HARS2P49590 506 aaKnown RBP12.58□□□□□ -0.4
LINC00959-201ENST00000456581 MTTPP55157 894 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 USP46P62068 366 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 LSAMPQ13449 338 aa12.58□□□□□ -0.4
LINC00959-201ENST00000456581 LSM12Q3MHD2 195 aaKnown RBP12.58□□□□□ -0.4
LINC00959-201ENST00000456581 RWDD4Q6NW29 188 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms