RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 KRT16P08779 473 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SNRPAP09012 282 aaKnown RBP3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PIRTP0C851 137 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ODC1P11926 461 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SKIP12755 728 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 WARSP23381 471 aaKnown RBP3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PCSK1P29120 753 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TYK2P29597 1187 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 CDC25CP30307 473 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PTPN7P35236 360 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PPM1AP35813 382 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PTPN9P43378 593 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 LHX1P48742 406 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SESN3P58005 492 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TSPY1Q01534 308 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ZBTB17Q13105 803 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PLD1Q13393 1074 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 RAB33AQ14088 237 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PDK1Q15118 436 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PCBP1Q15365 356 aaKnown RBP eCLIP3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ARL13BQ3SXY8 428 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 MGAT5BQ3V5L5 792 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TAF1BQ53T94 588 aaPredicted RBP3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 FAM78AQ5JUQ0 283 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PRSS36Q5K4E3 855 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PKN3Q6P5Z2 889 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 CYB5D1Q6P9G0 228 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 LIMS2Q7Z4I7 341 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 GPR149Q86SP6 731 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SLC26A11Q86WA9 606 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 RASSF3Q86WH2 238 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TOP6BLQ8N6T0 577 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 BANPQ8N9N5 519 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SHKBP1Q8TBC3 707 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 DQX1Q8TE96 717 aaKnown RBP3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 DENND1AQ8TEH3 1009 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 STK32AQ8WU08 396 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 CASP10Q92851 521 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SGSM3Q96HU1 749 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 LRRC37BQ96QE4 947 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 NPY6RQ99463 290 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 EBNA1BP2Q99848 306 aaKnown RBP3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TSSK1BQ9BXA7 367 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 FOXP3Q9BZS1 431 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 FOXQ1Q9C009 403 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 NMUR1Q9HB89 426 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PLAC1Q9HBJ0 212 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SLC38A7Q9NVC3 462 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TMEM51Q9NW97 253 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SLC24A2Q9UI40 661 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 CHKBQ9Y259 395 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 EFR3BQ9Y2G0 817 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 DERAQ9Y315 318 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 YIPF1Q9Y548 306 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 INSL5Q9Y5Q6 135 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 CEP295Q9C0D2 2601 aa3.11□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SHROOM3Q8TF72 1996 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 OBSL1O75147 1896 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 DSPP15924 2871 aaKnown RBP3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 A0A0A0MRY4 1105 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 LOC100653049A0A140TA62 436 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 BCLAF3A2AJT9 711 aaKnown RBP3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SDR42E2A6NKP2 422 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PRRG1O14668 218 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TPP1O14773 563 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 CHADO15335 359 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PHGDHO43175 533 aaKnown RBP3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 EDF1O60869 148 aaKnown RBP3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PAGE1O75459 146 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TCEA3O75764 348 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 KRT34O76011 436 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 KRT38O76015 456 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 FSBPO95073 299 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 STAU1O95793 577 aaKnown RBP3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ABHD2P08910 425 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 MYL2P10916 166 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 MYL4P12829 197 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SERPINB3P29508 390 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ALDH3A1P30838 453 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SERPINB4P48594 390 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TUBP50607 506 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ARFIP2P53365 341 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SLC5A3P53794 718 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ALDH18A1P54886 795 aaKnown RBP3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 NCALDP61601 193 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 SARNPP82979 210 aaKnown RBP3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 MXRA7P84157 204 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 UBE3AQ05086 875 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 KDSRQ06136 332 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 WASHC5Q12768 1159 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 CTBP1Q13363 440 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ZNF460Q14592 562 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TAZQ16635 292 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 PDK4Q16654 411 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 VWA5B1Q5TIE3 1220 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 TTC39BQ5VTQ0 682 aaPredicted RBP3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 FYB2Q5VWT5 728 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 ZNF280DQ6N043 979 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 CEP128Q6ZU80 1094 aa3.1□□□□□ -1.91
VSTM2A-OT1-201ENST00000456049 RAPH1Q70E73 1250 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms