RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 ASB3Q9Y575 518 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 ILVBLA1L0T0 632 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 EDF1O60869 148 aaKnown RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 ABCG1P45844 678 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 SERPINB4P48594 390 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 ERVFC1P60507 584 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 ZNF177Q13360 481 aaPredicted RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 MSLNQ13421 630 aaPredicted RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 SEPT6Q14141 434 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 ZNF235Q14590 738 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 PABPC1LQ4VXU2 614 aaKnown RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 PDPK2PQ6A1A2 396 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 CXorf57Q6NSI4 855 aaKnown RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 HERC6Q8IVU3 1022 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 DCLK2Q8N568 766 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 ACMSDQ8TDX5 336 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 PTCD2Q8WV60 388 aaKnown RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 MCMBPQ9BTE3 642 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 POLR1EQ9GZS1 481 aaKnown RBP13.24□□□□□ -0.29
TSFM-204ENST00000454289 PHTF1Q9UMS5 762 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 CPQQ9Y646 472 aa13.24□□□□□ -0.29
TSFM-204ENST00000454289 DOCK6Q96HP0 2047 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 KDELR3O43731 214 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 LRG1P02750 347 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 ADH1AP07327 375 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 C8AP07357 584 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 HSPA1AP0DMV8 641 aaKnown RBP13.23□□□□□ -0.29
TSFM-204ENST00000454289 HSPA1BP0DMV9 641 aaKnown RBP13.23□□□□□ -0.29
TSFM-204ENST00000454289 HDCP19113 662 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 ARNTP27540 789 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 SPRP35270 261 aaPredicted RBP13.23□□□□□ -0.29
TSFM-204ENST00000454289 ARCN1P48444 511 aaKnown RBP13.23□□□□□ -0.29
TSFM-204ENST00000454289 LIMK2P53671 638 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 OXCT1P55809 520 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 PDE1BQ01064 536 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 PDE1CQ14123 709 aaPredicted RBP13.23□□□□□ -0.29
TSFM-204ENST00000454289 Q6ZNB5 142 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 ANKS4BQ8N8V4 417 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 KREMEN2Q8NCW0 462 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 ARMC2Q8NEN0 867 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 ATXN7L3BQ96GX2 97 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 RAD9AQ99638 391 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 DDX50Q9BQ39 737 aaKnown RBP13.23□□□□□ -0.29
TSFM-204ENST00000454289 TCF25Q9BQ70 676 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 TREX1Q9NSU2 369 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 TBC1D30Q9Y2I9 924 aa13.23□□□□□ -0.29
TSFM-204ENST00000454289 HIDE1A8MVS5 230 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 GFRA2O00451 464 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 KIAA0754O94854 1291 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 LATS1O95835 1130 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 ATXN1LP0C7T5 689 aaKnown RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 MAGEA12P43365 314 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 SERPINH1P50454 418 aaKnown RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 CSE1LP55060 971 aaKnown RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 SIRPB2Q5JXA9 342 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 YTHDF3Q7Z739 585 aaKnown RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 SETD3Q86TU7 594 aaPredicted RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 ISL2Q96A47 359 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 GRAMD1AQ96CP6 724 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 ACE2Q9BYF1 805 aaPredicted RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 MANSC1Q9H8J5 431 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 UBA2Q9UBT2 640 aaPredicted RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 MTO1Q9Y2Z2 717 aaKnown RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 STARD13Q9Y3M8 1113 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 LOC285095A0A1B0GVY8 99 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 TBL1XO60907 577 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 VAPBO95292 243 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 BGNP21810 368 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 DNAJB1P25685 340 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 CTNNB1P35222 781 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 GMPRP36959 345 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 CNGA3Q16281 694 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 PPM1JQ5JR12 505 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 PLPP4Q5VZY2 271 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 RNF219Q5W0B1 726 aaPredicted RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 ALG1LQ6GMV1 187 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 FSTL4Q6MZW2 842 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 PSRC1Q6PGN9 363 aaPredicted RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 CCDC149Q6ZUS6 474 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 OTOAQ7RTW8 1153 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 CMC1Q7Z7K0 106 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 ACVR1CQ8NER5 493 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 MRPS31Q92665 395 aaKnown RBP13.22□□□□□ -0.29
TSFM-204ENST00000454289 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 MGME1Q9BQP7 344 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 MECRQ9BV79 373 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 SNX15Q9NRS6 342 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 SEPT3Q9UH03 358 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 EMCNQ9ULC0 261 aa13.22□□□□□ -0.29
TSFM-204ENST00000454289 MYO7AQ13402 2215 aa13.21□□□□□ -0.29
TSFM-204ENST00000454289 CCT8L1PA6NM43 557 aa13.21□□□□□ -0.29
TSFM-204ENST00000454289 TLL1O43897 1013 aa13.21□□□□□ -0.29
TSFM-204ENST00000454289 GJA1P17302 382 aa13.21□□□□□ -0.29
TSFM-204ENST00000454289 BMPR1AP36894 532 aa13.21□□□□□ -0.29
TSFM-204ENST00000454289 RGRP47804 291 aa13.21□□□□□ -0.29
TSFM-204ENST00000454289 CORO7P57737 925 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms