RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SLC1A2P43004 574 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 RPS24P62847 133 aaKnown RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 USP41Q3LFD5 358 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 VWA5B1Q5TIE3 1220 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 IL31Q6EBC2 164 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 PTAR1Q7Z6K3 402 aaPredicted RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 PPP4R1Q8TF05 950 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 KCTD4Q8WVF5 259 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 SKA1Q96BD8 255 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 ELMO2Q96JJ3 720 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 EXOC2Q96KP1 924 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 SEMA3CQ99985 751 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 NMRAL1Q9HBL8 299 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 SMPD4Q9NXE4 827 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 ATP11BQ9Y2G3 1177 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 ATP5HO75947 161 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 SEC24AO95486 1093 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 ESRRAP11474 423 aaPredicted RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 SLC6A4P31645 630 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 SKIV2L2P42285 1042 aaKnown RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 RASSF2P50749 326 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 KDSRQ06136 332 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 POTEHQ6S545 545 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 WDR75Q8IWA0 830 aaKnown RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 PGBD5Q8N414 524 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 OR7D4Q8NG98 312 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 PIWIL2Q8TC59 973 aaKnown RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 BHMTQ93088 406 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 SGF29Q96ES7 293 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 TSNARE1Q96NA8 513 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 LRMDAQ9H2I8 198 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 KCNK4Q9NYG8 393 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 RUVBL2Q9Y230 463 aaKnown RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 KCTD3Q9Y597 815 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 WASH4PA8MWX3 477 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 TBC1D4O60343 1298 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 SLC4A1P02730 911 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 SERPINE1P05121 402 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 CCL5P13501 91 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 SERPINH1P50454 418 aaKnown RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 NRG1Q02297 640 aaPredicted RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 USP4Q13107 963 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 ZNF235Q14590 738 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 PTPRCAPQ14761 206 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 IMP4Q96G21 291 aaKnown RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 SPATA17Q96L03 361 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 VN1R3Q9BXE9 311 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 WWP1Q9H0M0 922 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 RHOJQ9H4E5 214 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 DNMT3LQ9UJW3 386 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 ZFP37Q9Y6Q3 630 aaPredicted RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 OR51F1A6NGY5 319 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 MPOP05164 745 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 SPATA31D3P0C874 917 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 PAMP19021 973 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 GLDCP23378 1020 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 ARCN1P48444 511 aaKnown RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 HARS2P49590 506 aaKnown RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 CSE1LP55060 971 aaKnown RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 PLD1Q13393 1074 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 UBAP2LQ14157 1087 aaKnown RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 LBRQ14739 615 aaKnown RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 ZNF789Q5FWF6 425 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 KDELC1Q6UW63 502 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 NAPRTQ6XQN6 538 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 SPATA31D4Q6ZUB0 917 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 LRRC49Q8IUZ0 686 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 CEP97Q8IW35 865 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 OR52K2Q8NGK3 314 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 BLOC1S5Q8TDH9 187 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 NSL1Q96IY1 281 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 OMDQ99983 421 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 UBE2OQ9C0C9 1292 aaKnown RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 IGLV3-10A0A075B6K4 115 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 FAM95CA0A1B0GW59 222 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 MUSKO15146 869 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 DIAPH2O60879 1101 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 HSPA4LO95757 839 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 CCR10P46092 362 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 SERINC3Q13530 473 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 GALNT3Q14435 633 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 INSCQ1MX18 579 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 CCDC153Q494R4 210 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 NEPROQ6NW34 567 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 CNSTQ6PJW8 725 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 C16orf59Q7L2K0 433 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 MFSD6LQ8IWD5 586 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 GPR22Q99680 433 aa11.91□□□□□ -0.5
VTA1-203ENST00000452973 SUDS3Q9H7L9 328 aaPredicted RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.91□□□□□ -0.5
VTA1-203ENST00000452973 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.9□□□□□ -0.5
VTA1-203ENST00000452973 GYG2O15488 501 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 COCHO43405 550 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 SLC12A2P55011 1212 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 IKBKEQ14164 716 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 SLC39A5Q6ZMH5 540 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 AGAP11Q8TF27 550 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 IFT43Q96FT9 208 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms