RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RAPGEF1Q13905 1077 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 FZD2Q14332 565 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 DRAP1Q14919 205 aaPredicted RBP11.09□□□□□ -0.63
USP1-204ENST00000452143 CAMK4Q16566 473 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 VWA3BQ502W6 1294 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 CARD16Q5EG05 197 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 ARTNQ5T4W7 220 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 IGF2-ASQ6U949 168 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 PARS2Q7L3T8 475 aaKnown RBP11.09□□□□□ -0.63
USP1-204ENST00000452143 FAM131BQ86XD5 332 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 EPS8L1Q8TE68 723 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 ASB12Q8WXK4 309 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 GRAMD1AQ96CP6 724 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 HIC2Q96JB3 615 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 FEM1CQ96JP0 617 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 LENG8Q96PV6 779 aaPredicted RBP11.09□□□□□ -0.63
USP1-204ENST00000452143 TUBGCP2Q9BSJ2 902 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 SPON2Q9BUD6 331 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 TMEM59LQ9UK28 342 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 CSNK1G3Q9Y6M4 447 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 U3KQA8 63 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 PIEZO2Q9H5I5 2752 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 POM121BA6NF01 834 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 F8VZ95 297 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 FPGTO14772 594 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 USP12O75317 370 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 CSO75390 466 aaKnown RBP11.08□□□□□ -0.64
USP1-204ENST00000452143 C1QL1O75973 258 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 ENDOD1O94919 500 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 PAK4O96013 591 aaPredicted RBP11.08□□□□□ -0.64
USP1-204ENST00000452143 LSSP48449 732 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 MAPKAPK2P49137 400 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 TMPRSS3P57727 454 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 NOMO3P69849 1222 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 GABREP78334 506 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 CCDC173Q0VFZ6 552 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 FGL2Q14314 439 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 ARL13BQ3SXY8 428 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 MANEALQ5VSG8 457 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 BROXQ5VW32 411 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 TRNP1Q6NT89 227 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 DPY19L2P1Q6NXN4 242 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 OR2AP1Q8NGE2 309 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 IFI44Q8TCB0 444 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 BMFQ96LC9 184 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 TBATAQ96M53 351 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 CFAP57Q96MR6 1250 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 C1QTNF2Q9BXJ5 285 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 NAA15Q9BXJ9 866 aaKnown RBP11.08□□□□□ -0.64
USP1-204ENST00000452143 OSBPL1AQ9BXW6 950 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 ABCG4Q9H172 646 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 POLR1BQ9H9Y6 1135 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 TMPRSS4Q9NRS4 437 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 THSD1Q9NS62 852 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 FCF1Q9Y324 198 aaKnown RBP11.08□□□□□ -0.64
USP1-204ENST00000452143 RAI2Q9Y5P3 530 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 FHOD1Q9Y613 1164 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 RP1P56715 2156 aa11.08□□□□□ -0.64
USP1-204ENST00000452143 CAPN8A6NHC0 703 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 GOLGA8SH3BPF8 625 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 ERVH48-1M5A8F1 160 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 TPP1O14773 563 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 AQP9O43315 295 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 NEBLO76041 1014 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 GSRP00390 522 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 MPOP05164 745 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 UCHL3P15374 230 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 RHOQP17081 205 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 ERCC5P28715 1186 aaPredicted RBP11.07□□□□□ -0.64
USP1-204ENST00000452143 PFN3P60673 137 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 CXADRP78310 365 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 SGCGQ13326 291 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 PDE1CQ14123 709 aaPredicted RBP11.07□□□□□ -0.64
USP1-204ENST00000452143 PTK2BQ14289 1009 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 POLD3Q15054 466 aaPredicted RBP11.07□□□□□ -0.64
USP1-204ENST00000452143 ZNF805Q5CZA5 627 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 KLHDC7AQ5VTJ3 777 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 TAF3Q5VWG9 929 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 NOP9Q86U38 636 aaKnown RBP11.07□□□□□ -0.64
USP1-204ENST00000452143 ZNF677Q86XU0 584 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 DRC7Q8IY82 874 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 TPCN2Q8NHX9 752 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 MAPK15Q8TD08 544 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 BTN2A2Q8WVV5 523 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 ARHGEF2Q92974 986 aaKnown RBP11.07□□□□□ -0.64
USP1-204ENST00000452143 KLF6Q99612 283 aaPredicted RBP11.07□□□□□ -0.64
USP1-204ENST00000452143 STK33Q9BYT3 514 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 TM6SF2Q9BZW4 377 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 MAGEH1Q9H213 219 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 TMEM248Q9NWD8 314 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 HECAQ9UBI9 543 aaPredicted RBP11.07□□□□□ -0.64
USP1-204ENST00000452143 OR12D3Q9UGF7 316 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 DACH1Q9UI36 760 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 SALL4Q9UJQ4 1053 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 HPCAL4Q9UM19 191 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 LRP4O75096 1905 aa11.07□□□□□ -0.64
USP1-204ENST00000452143 EME2A4GXA9 379 aaPredicted RBP11.06□□□□□ -0.64
USP1-204ENST00000452143 ZSCAN5CA6NGD5 496 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms