RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 HLA-DQB2P05538 268 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 CTSLP07711 333 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 RBP3P10745 1247 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 RBL1P28749 1068 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 GKP32189 559 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 RECQLP46063 649 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 SNRPD1P62314 119 aaKnown RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 IFI35P80217 286 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 LMNB2Q03252 620 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 ZNF33AQ06730 810 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 C2orf54Q08AI8 447 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 HNRNPDQ14103 355 aaKnown RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 ANGPT1Q15389 498 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 ZNF776Q68DI1 518 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 HEATR6Q6AI08 1181 aaKnown RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 DRICH1Q6PGQ1 229 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 DARS2Q6PI48 645 aaKnown RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 RASSF3Q86WH2 238 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 TMPRSS6Q8IU80 811 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 MMAAQ8IVH4 418 aaKnown RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 CDKL3Q8IVW4 592 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 PLPP6Q8IY26 295 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 RYBPQ8N488 228 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 CAMKK1Q8N5S9 505 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 PRELID2Q8N945 189 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 MDGA1Q8NFP4 955 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 SLC35B2Q8TB61 432 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 GRIN3AQ8TCU5 1115 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 GRK7Q8WTQ7 553 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 C1orf54Q8WWF1 131 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 OR8D1Q8WZ84 308 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 MAGOHBQ96A72 148 aaKnown RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 VOPP1Q96AW1 172 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 MRGPRX1Q96LB2 322 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 CCDC114Q96M63 670 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 GDAP1L1Q96MZ0 367 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 PSKH2Q96QS6 385 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 IL12RB2Q99665 862 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 TPSD1Q9BZJ3 242 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 RSPH9Q9H1X1 276 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 ZDHHC6Q9H6R6 413 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 FBRSQ9HAH7 460 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 RBM22Q9NW64 420 aaKnown RBP eCLIP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 EVLQ9UI08 416 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-202ENST00000451053 SARDHQ9UL12 918 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 WASF2Q9Y6W5 498 aa13.22□□□□□ -0.29
VPS33A-202ENST00000451053 ZDBF2Q9HCK1 2354 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 TTC24A2A3L6 582 aaPredicted RBP13.21□□□□□ -0.29
VPS33A-202ENST00000451053 ALOX15BO15296 676 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 INSIG1O15503 277 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
VPS33A-202ENST00000451053 LIASO43766 372 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 ALDH1A2O94788 518 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 PTPN3P26045 913 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 PSMD8P48556 350 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 RENBPP51606 427 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 METAP1P53582 386 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 NRLP54845 237 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 MAXP61244 160 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 RPS14P62263 151 aaKnown RBP13.21□□□□□ -0.29
VPS33A-202ENST00000451053 WASHC5Q12768 1159 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 MYLK3Q32MK0 819 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 POM121L1PQ3SYA9 428 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 GLE1Q53GS7 698 aaKnown RBP13.21□□□□□ -0.29
VPS33A-202ENST00000451053 MAATS1Q7Z4T9 603 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 PGBD3Q8N328 593 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 BBS5Q8N3I7 341 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 CNTD1Q8N815 330 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 HTR3CQ8WXA8 447 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 SIPA1Q96FS4 1042 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 NSMCE3Q96MG7 304 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 MGME1Q9BQP7 344 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 HEPHQ9BQS7 1158 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 EBF1Q9UH73 591 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 DNPEPQ9ULA0 475 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 PPM1HQ9ULR3 514 aa13.21□□□□□ -0.29
VPS33A-202ENST00000451053 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
VPS33A-202ENST00000451053 BCLAF3A2AJT9 711 aaKnown RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 MID1O15344 667 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 RNASEH1O60930 286 aaKnown RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 LEFTY1O75610 366 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 NEBLO76041 1014 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 POP4O95707 220 aaKnown RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 IL1BP01584 269 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 CR2P20023 1033 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 HOXA6P31267 233 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 COILP38432 576 aaPredicted RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 HSPA9P38646 679 aaKnown RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 CSNK1DP48730 415 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 FNTBP49356 437 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 SCNN1BP51168 640 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 NUBP1P53384 320 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 DSC2Q02487 901 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 SNX1Q13596 522 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 DHX34Q14147 1143 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms