RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ARHGAP8P85298 464 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 ERI1Q8IV48 349 aaKnown RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 ZBTB8BQ8NAP8 495 aaPredicted RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 GLIS3Q8NEA6 775 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 BPIFB6Q8NFQ5 453 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 RCN3Q96D15 328 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 DNAJC19Q96DA6 116 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 SPATA13Q96N96 652 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 ELOVL6Q9H5J4 265 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 TRIM39Q9HCM9 518 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CORO2BQ9UQ03 480 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 INVSQ9Y283 1065 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 EFR3BQ9Y2G0 817 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 TNPO3Q9Y5L0 923 aaKnown RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 PHLPP1O60346 1717 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 KLHL33A6NCF5 533 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 EPHB6O15197 1021 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 UGT2B11O75310 529 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 NADKO95544 446 aaPredicted RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CCNE2O96020 404 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 DARSP14868 501 aaKnown RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CLCN3P51790 818 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 GRIK3Q13003 919 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CBWD6Q4V339 395 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CBWD3Q5JTY5 395 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CBWD5Q5RIA9 395 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 MRPL57Q9BQC6 102 aaKnown RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 BARX2Q9UMQ3 279 aaPredicted RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 FLT3P36888 993 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 ACLYP53396 1101 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 MAP4K3Q8IVH8 894 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 ADGRF2Q8IZF7 708 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 AHI1Q8N157 1196 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CNTD1Q8N815 330 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CLPBQ9H078 707 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 DNAAF2Q9NVR5 837 aaKnown RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CLN6Q9NWW5 311 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 DDX43Q9NXZ2 648 aaKnown RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 GNPTGQ9UJJ9 305 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 C9orf131Q5VYM1 1079 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 CACTIN-AS1Q8N1I8 211 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 ZSCAN32Q9NX65 697 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 ZNF624Q9P2J8 865 aaPredicted RBP14.06□□□□□ -0.16
ITGB4-202ENST00000449880 PLLPQ9Y342 182 aa14.06□□□□□ -0.16
ITGB4-202ENST00000449880 LRRC37A3O60309 1634 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CLDN25C9JDP6 229 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CCNKO75909 580 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 UMPSP11172 480 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 POLD2P49005 469 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 ALDH6A1Q02252 535 aaKnown RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 SPIDRQ14159 915 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 ZNF438Q7Z4V0 828 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 NT5DC4Q86YG4 428 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 EPHX4Q8IUS5 362 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 HERC6Q8IVU3 1022 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 DPP10Q8N608 796 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CERS2Q96G23 380 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CDK5RAP1Q96SZ6 601 aaKnown RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 EBNA1BP2Q99848 306 aaKnown RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 hCG_1818297A0A087WSY0 165 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 TCEA3O75764 348 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CENPAP49450 140 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 C5orf22Q49AR2 442 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 ACOT1Q86TX2 421 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 ZNF540Q8NDQ6 660 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 SLC44A1Q8WWI5 657 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 WDR18Q9BV38 432 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 TAS2R13Q9NYV9 303 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CHKBQ9Y259 395 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 TMED5Q9Y3A6 229 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 GPC6Q9Y625 555 aaPredicted RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 TMEM150BA6NC51 233 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CPSF4O95639 269 aaKnown RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 HMGCRP04035 888 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 MIPP30301 263 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 GUCA1AP43080 201 aaPredicted RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 GRIA4P48058 902 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CLCN5P51795 746 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 AADACL2Q6P093 401 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 ZNF549Q6P9A3 640 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 PRR23BQ6ZRT6 265 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 ITIH5Q86UX2 942 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 MCFD2Q8NI22 146 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 BHMTQ93088 406 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 SENP6Q9GZR1 1112 aaPredicted RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 GBA2Q9HCG7 927 aaPredicted RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 SETD1AO15047 1707 aaKnown RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 TGFB3P10600 412 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 EPHX2P34913 555 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 PTP4A2Q12974 167 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 DGCR6Q14129 220 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 PIK3C3Q8NEB9 887 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 PHF21BQ96EK2 531 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 TRMOQ9BU70 441 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 OSBPL10Q9BXB5 764 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 CADM1Q9BY67 442 aaKnown RBP14.05□□□□□ -0.16
ITGB4-202ENST00000449880 RHOBTB2Q9BYZ6 727 aa14.05□□□□□ -0.16
ITGB4-202ENST00000449880 EPB41L4BQ9H329 900 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms