RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 NUDT1P36639 197 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 RECQLP46063 649 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 PAPOLAP51003 745 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 SLC25A11Q02978 314 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 TRIM14Q14142 442 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 TEAD4Q15561 434 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 ZNF284Q2VY69 593 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 TMEM259Q4ZIN3 620 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 POLNQ7Z5Q5 900 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 CPNE8Q86YQ8 564 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 TP53INP2Q8IXH6 220 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 NPWQ8N729 165 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 GRIN3AQ8TCU5 1115 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 TSC1Q92574 1164 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 TM6SF2Q9BZW4 377 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 ETNK2Q9NVF9 386 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 DONSONQ9NYP3 566 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 LHX3Q9UBR4 397 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 IP6K2Q9UHH9 426 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 ZFR2Q9UPR6 939 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 DMTF1Q9Y222 760 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 PCDHGB2Q9Y5G2 931 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 FADS3Q9Y5Q0 445 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 AKAP13Q12802 2813 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 C16orf96A6NNT2 1141 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 H0Y8X5 98 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 SPINT1O43278 529 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 AP1G1O43747 822 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 RNGTTO60942 597 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 ARSEP51690 589 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 ADKP55263 362 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 SNRPD1P62314 119 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 CCDC15Q0P6D6 951 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 SHBQ15464 509 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 PPP6R3Q5H9R7 873 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 ATXN7L2Q5T6C5 722 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 NAPEPLDQ6IQ20 393 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 PRPF39Q86UA1 669 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 HORMAD1Q86X24 394 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 SPATS2Q86XZ4 545 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 MFSD2AQ8NA29 543 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 TMEM145Q8NBT3 493 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 OR6K2Q8NGY2 324 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 TEKT4Q8WW24 435 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 CELF6Q96J87 481 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 SERAC1Q96JX3 654 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 CAMK1GQ96NX5 476 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 CPEB1Q9BZB8 566 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 TM7SF3Q9NS93 570 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 ABHD10Q9NUJ1 306 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 ANAPC7Q9UJX3 599 aa14.29□□□□□ -0.12
RTFDC1-204ENST00000449062 A0A1W2PQU0 124 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 MYO1FO00160 1098 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 TLR4O00206 839 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 AREL1O15033 823 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 INSIG1O15503 277 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 PCDHGA12O60330 932 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 MFAP3LO75121 409 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 CER1O95813 267 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 ADRB3P13945 408 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 AMPD1P23109 780 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 MAT2AP31153 395 aaKnown RBP14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 NEK3P51956 506 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 SHC2P98077 582 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 FGL2Q14314 439 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 ATP13A4Q4VNC1 1196 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 PRAMEF14Q5SWL7 426 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 ARHGAP36Q6ZRI8 547 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 PARS2Q7L3T8 475 aaKnown RBP14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 IQCHQ86VS3 1027 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 BAHD1Q8TBE0 780 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 NSMCE3Q96MG7 304 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 CSPG4P5Q96PW8 444 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 C1QTNF2Q9BXJ5 285 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 SLC32A1Q9H598 525 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 ZDHHC6Q9H6R6 413 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 PCDH18Q9HCL0 1135 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 PCOLCE2Q9UKZ9 415 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 USP24Q9UPU5 2620 aa14.28□□□□□ -0.12
RTFDC1-204ENST00000449062 NYNRINQ9P2P1 1898 aaKnown RBP14.27□□□□□ -0.12
RTFDC1-204ENST00000449062 A0A1B0GTQ1 180 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 SPAARA0A1B0GVQ0 90 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 ARHGAP42A6NI28 874 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 PRAMEF26H0Y7S4 382 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 KRIT1O00522 736 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 DFNA5O60443 496 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 BUB1BO60566 1050 aaPredicted RBP14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 PROSCO94903 275 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 PEX11BO96011 259 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 H2AFZP0C0S5 128 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 TIMP2P16035 220 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 ABL2P42684 1182 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 CSNK1DP48730 415 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 NXPH1P58417 271 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 HNRNPDQ14103 355 aaKnown RBP14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 SMTNL2Q2TAL5 461 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 SEL1L3Q68CR1 1132 aa14.27□□□□□ -0.13
RTFDC1-204ENST00000449062 GDPD4Q6W3E5 623 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms