RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TOP6BLQ8N6T0 577 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 NAT14Q8WUY8 206 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 HDAC11Q96DB2 347 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 NDNQ99608 321 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 PKP2Q99959 881 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 C6orf203Q9P0P8 240 aaPredicted RBP13.07□□□□□ -0.32
SHC1-210ENST00000448116 NUDT5Q9UKK9 219 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 CRTAMO95727 393 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 CLPTM1O96005 669 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 PGK1P00558 417 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 HDCP19113 662 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 DPP6P42658 865 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 MAGEA8P43361 318 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 TAS2R39P59534 338 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 ZNF423Q2M1K9 1284 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 ZNF470Q6ECI4 717 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 LSMEM2Q8N112 164 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 SDR16C5Q8N3Y7 309 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 ZMIZ2Q8NF64 920 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 KCTD13Q8WZ19 329 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 UBAP1Q9NZ09 502 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 LZTS1Q9Y250 596 aa13.07□□□□□ -0.32
SHC1-210ENST00000448116 COPG1Q9Y678 874 aaKnown RBP13.07□□□□□ -0.32
SHC1-210ENST00000448116 ZNF638Q14966 1978 aaKnown RBP13.07□□□□□ -0.32
SHC1-210ENST00000448116 KCNU1A8MYU2 1149 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 DNAJA2O60884 412 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 CHRNA4P43681 627 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 GALNT2Q10471 571 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 PTK2BQ14289 1009 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 NRF1Q16656 503 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 LPPQ93052 612 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
SHC1-210ENST00000448116 SLC9A7Q96T83 725 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 GAD1Q99259 594 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 PRPF18Q99633 342 aaKnown RBP13.06□□□□□ -0.32
SHC1-210ENST00000448116 C1QTNF1Q9BXJ1 281 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 GRIP2Q9C0E4 1043 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 CASTOR2A6NHX0 329 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 PTGESO14684 152 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 CASQ2O14958 399 aaPredicted RBP13.06□□□□□ -0.32
SHC1-210ENST00000448116 CSPG5O95196 566 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 MOCS2O96007 188 aaPredicted RBP13.06□□□□□ -0.32
SHC1-210ENST00000448116 MYL3P08590 195 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 KCNE1P15382 129 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 TSPAN8P19075 237 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 RAB10P61026 200 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 SEMA3BQ13214 749 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 DYNC1I2Q13409 638 aaKnown RBP13.06□□□□□ -0.32
SHC1-210ENST00000448116 PKN3Q6P5Z2 889 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 TMEM151AQ8N4L1 468 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 SMG8Q8ND04 991 aaKnown RBP13.06□□□□□ -0.32
SHC1-210ENST00000448116 STYXQ8WUJ0 223 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 NTAN1Q96AB6 310 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 PHF21BQ96EK2 531 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 BTBD9Q96Q07 612 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 TBL1YQ9BQ87 522 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 TINF2Q9BSI4 451 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 FSD1LQ9BXM9 530 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 PCDHAC1Q9H158 963 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 POMKQ9H5K3 350 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 BCAP29Q9UHQ4 241 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 GNEQ9Y223 722 aaKnown RBP13.06□□□□□ -0.32
SHC1-210ENST00000448116 ANKRD6Q9Y2G4 727 aa13.06□□□□□ -0.32
SHC1-210ENST00000448116 GPC4O75487 556 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 RTN3O95197 1032 aaPredicted RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 BEX3Q00994 111 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 ADGRE1Q14246 886 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 SLC5A9Q2M3M2 681 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 PIGGQ5H8A4 983 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 NOMO2Q5JPE7 1267 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 PAOXQ6QHF9 649 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 RBM44Q6ZP01 1051 aaKnown RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 TRIM67Q6ZTA4 783 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 TAC4Q86UU9 113 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 LILRA2Q8N149 483 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 ATPAF2Q8N5M1 289 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 DRAXINQ8NBI3 349 aaPredicted RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 PDCD6IPQ8WUM4 868 aaKnown RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 MAML3Q96JK9 1138 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 SHROOM3Q8TF72 1996 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 C9IYK1 514 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 AURKAO14965 403 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 PEX1O43933 1283 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 PABPC4LP0CB38 370 aaKnown RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 NELFEP18615 380 aaKnown RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 FGFR3P22607 806 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 BDNFP23560 247 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 GJA9P57773 515 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 PDAP1Q13442 181 aaKnown RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 CYTH1Q15438 398 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 PCID2Q5JVF3 399 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 C14orf80Q86SX3 495 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 LINC00523Q86TU6 105 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 PGAM4Q8N0Y7 254 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 PPHLN1Q8NEY8 458 aaKnown RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 HEXDCQ8WVB3 486 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms