RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 C22orf39Q6P5X5 142 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 TMEM92Q6UXU6 159 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 PRR23BQ6ZRT6 265 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 Q6ZVU0 165 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 C11orf74Q86VG3 221 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 DCLK2Q8N568 766 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 PAF1Q8N7H5 531 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 ZNF366Q8N895 744 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 LRRN4Q8WUT4 740 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 C1orf54Q8WWF1 131 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 HTR3CQ8WXA8 447 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 LOXL4Q96JB6 756 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 ZC3H10Q96K80 434 aaKnown RBP11.77□□□□□ -0.53
LINC00408-201ENST00000447784 GDAP1L1Q96MZ0 367 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 VAT1Q99536 393 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 HINFPQ9BQA5 517 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 TM6SF2Q9BZW4 377 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 TNKS2Q9H2K2 1166 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 HCN2Q9UL51 889 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 ZNF148Q9UQR1 794 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 R3HDM2Q9Y2K5 976 aaKnown RBP11.77□□□□□ -0.53
LINC00408-201ENST00000447784 TTLL3Q9Y4R7 772 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 ZFHX2Q9C0A1 2572 aaPredicted RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 KCNN4O15554 427 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 SMAD6O43541 496 aaKnown RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 LIASO43766 372 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 GSRP00390 522 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 STIP1P31948 543 aaKnown RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 ACTN2P35609 894 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 MAPK8P45983 427 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 IFI35P80217 286 aaPredicted RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 LMNB2Q03252 620 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 ENPP2Q13822 863 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 TUBB2AQ13885 445 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 ELAVL3Q14576 367 aaKnown RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 USP39Q53GS9 565 aaKnown RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 ANO7Q6IWH7 933 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 GSTA5Q7RTV2 222 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 PGBD3Q8N328 593 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 FAM160A2Q8N612 972 aaPredicted RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 MDGA1Q8NFP4 955 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 OR2AP1Q8NGE2 309 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 FRS2Q8WU20 508 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 ATG4AQ8WYN0 398 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 OR8D1Q8WZ84 308 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 MAML1Q92585 1016 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 MAGOHBQ96A72 148 aaKnown RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 PSKH2Q96QS6 385 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 TUBB2BQ9BVA1 445 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 AP1M1Q9BXS5 423 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 FBRSQ9HAH7 460 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 NT5MQ9NPB1 228 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 BCCIPQ9P287 314 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 KLHL8Q9P2G9 620 aaPredicted RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 AMACRQ9UHK6 382 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 FEZ2Q9UHY8 353 aaPredicted RBP11.76□□□□□ -0.53
LINC00408-201ENST00000447784 TRHDEQ9UKU6 1024 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 ACTL7AQ9Y615 435 aa11.76□□□□□ -0.53
LINC00408-201ENST00000447784 TCRBV21S2A2A0A5A6 115 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 BCLAF3A2AJT9 711 aaKnown RBP11.75□□□□□ -0.53
LINC00408-201ENST00000447784 RNF103O00237 685 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 SIN3BO75182 1162 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 POP4O95707 220 aaKnown RBP11.75□□□□□ -0.53
LINC00408-201ENST00000447784 CD160O95971 181 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 PEX11BO96011 259 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 VAV1P15498 845 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 TGM1P22735 817 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 CES1P23141 567 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 RBL1P28749 1068 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 SCNN1BP51168 640 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 CKAP4Q07065 602 aaKnown RBP11.75□□□□□ -0.53
LINC00408-201ENST00000447784 NSUN2Q08J23 767 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00408-201ENST00000447784 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
LINC00408-201ENST00000447784 LPAL2Q16609 132 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 MYLK3Q32MK0 819 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 CFAP58Q5T655 872 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 C9orf64Q5T6V5 341 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 FAM46CQ5VWP2 391 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 ITPRIPL1Q6GPH6 555 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 DPY19L3Q6ZPD9 716 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 PID1Q7Z2X4 250 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 CREG2Q8IUH2 290 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 TEX26Q8N6G2 289 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 CCDC89Q8N998 374 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 FAM71DQ8N9W8 422 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 OR2A12Q8NGT7 310 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 OR2T3Q8NH03 318 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 SLC35B2Q8TB61 432 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 GANCQ8TET4 914 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 PRCCQ92733 491 aaPredicted RBP11.75□□□□□ -0.53
LINC00408-201ENST00000447784 PTPRN2Q92932 1015 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 ERLEC1Q96DZ1 483 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 MYO19Q96H55 970 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 AGAP3Q96P47 875 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 HEPHQ9BQS7 1158 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 POLR1EQ9GZS1 481 aaKnown RBP11.75□□□□□ -0.53
LINC00408-201ENST00000447784 MTG2Q9H4K7 406 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 CD248Q9HCU0 757 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms