RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 IL18BPO95998 194 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 AFPP02771 609 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 ENO2P09104 434 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 VDRP11473 427 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 COMTP21964 271 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 HOXA6P31267 233 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 NBL1P41271 181 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 IFNAR2P48551 515 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 KIF11P52732 1056 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 CACNA2D1P54289 1103 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 BCAT1P54687 386 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 RAD23BP54727 409 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 GOLGA8FQ08AF8 430 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 GOLGA8DPQ0D2H9 430 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 USP10Q14694 798 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 ANGPT1Q15389 498 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 FBXO43Q4G163 708 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 PREPLQ4J6C6 727 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 USP39Q53GS9 565 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 ISM2Q6H9L7 571 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 CLEC20AQ6ZU45 233 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 CCDC186Q7Z3E2 898 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 SCML4Q8N228 414 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 SPEM1Q8N4L4 309 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 ARL14EPQ8N8R7 260 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 C12orf29Q8N999 325 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 SLC4A11Q8NBS3 891 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 ZMIZ2Q8NF64 920 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 SH3RF2Q8TEC5 729 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 LRRC3BQ96PB8 259 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 KCNK16Q96T55 309 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 THAP9Q9H5L6 903 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 CCSER2Q9H7U1 834 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 MMRN2Q9H8L6 949 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 TRPC7Q9HCX4 862 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 LMBRD1Q9NUN5 540 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 TMEM30AQ9NV96 361 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 DUS2Q9NX74 493 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 CLIC5Q9NZA1 410 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 HESX1Q9UBX0 185 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 HMGXB4Q9UGU5 601 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 EP300Q09472 2414 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 HELZP42694 1942 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 TICRRQ7Z2Z1 1910 aa8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 ZFHX2Q9C0A1 2572 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-206ENST00000447024 FANCMQ8IYD8 2048 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 C2orf78A6NCI8 922 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 SHISA7A6NL88 538 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 HHLA1C9JL84 531 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 ATG13O75143 517 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 DCNP07585 359 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CHRNB1P11230 501 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CCDC130P13994 396 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CD58P19256 250 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 DRD1P21728 446 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 ATP5C1P36542 298 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 EIF2DP41214 584 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CCR3P51677 355 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 MAP3K7CLP57077 242 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 ABHD18Q0P651 414 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 BST2Q10589 180 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 GRSF1Q12849 480 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CNGA2Q16280 664 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CAMK4Q16566 473 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 FXNQ16595 210 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 TPD52L1Q16890 204 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 TMEM196Q5HYL7 178 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 RAB41Q5JT25 222 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 AGBL4Q5VU57 503 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 LCLAT1Q6UWP7 414 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 USP53Q70EK8 1073 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 UBR7Q8N806 425 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 ST13P5Q8NFI4 369 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 SCAMP5Q8TAC9 235 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 LMO3Q8TAP4 145 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 ATOH1Q92858 354 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 TWNKQ96RR1 684 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CYP2S1Q96SQ9 504 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 TACO1Q9BSH4 297 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 ECT2Q9H8V3 914 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 FAM49BQ9NUQ9 324 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CNTN6Q9UQ52 1028 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 CCL26Q9Y258 94 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 PCDHGA2Q9Y5H1 932 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 PATJQ8NI35 1801 aa8.12□□□□□ -1.11
SMARCE1-206ENST00000447024 GVINP1Q7Z2Y8 2422 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 CCDC163A0A0D9SF12 145 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 ZNF839A8K0R7 811 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 LEFTY2O00292 366 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 XPO1O14980 1071 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 COCHO43405 550 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 TLR5O60602 858 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 RALAP11233 206 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 COL6A2P12110 1019 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 ACO1P21399 889 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 GRK2P25098 689 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 ADORA2BP29275 332 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 GRK3P35626 688 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms