RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 C1orf216Q8TAB5 229 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 FAM71BQ8TC56 605 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 CALN1Q9BXU9 219 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 GOLPH3Q9H4A6 298 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 SP110Q9HB58 689 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 DYRK4Q9NR20 520 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 DLL3Q9NYJ7 618 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 DONSONQ9NYP3 566 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 SUSD2Q9UGT4 822 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 PCDHA13Q9Y5I0 950 aa15.07■□□□□ 0
HDAC4-204ENST00000446876 DCDC2BA2VCK2 349 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 C10orf142B7Z368 130 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 CDX4O14627 284 aaPredicted RBP15.06■□□□□ 0
HDAC4-204ENST00000446876 SLC7A4O43246 635 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 MFSD11O43934 449 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 NDUFA10O95299 355 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 IGSF6O95976 241 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 UGT2B4P06133 528 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 TNNT1P13805 278 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 CD27P26842 260 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 CDC25BP30305 580 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 RGRP47804 291 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 CSNK1EP49674 416 aaKnown RBP15.06■□□□□ 0
HDAC4-204ENST00000446876 BNC1Q01954 994 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 SPA17Q15506 151 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 MYLK3Q32MK0 819 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 INO80DQ53TQ3 878 aaPredicted RBP15.06■□□□□ 0
HDAC4-204ENST00000446876 ZFYVE27Q5T4F4 411 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 ERN2Q76MJ5 926 aaKnown RBP15.06■□□□□ 0
HDAC4-204ENST00000446876 RABEPKQ7Z6M1 372 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 KCTD6Q8NC69 237 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 ACRBPQ8NEB7 543 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 PCDH19Q8TAB3 1148 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 CASKIN2Q8WXE0 1202 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 RAPGEF5Q92565 580 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 GDAP1L1Q96MZ0 367 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 SLC6A18Q96N87 628 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 TM9SF3Q9HD45 589 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 TMEM9BQ9NQ34 198 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 IPO11Q9UI26 975 aaKnown RBP15.06■□□□□ 0
HDAC4-204ENST00000446876 LCMT1Q9UIC8 334 aa15.06■□□□□ 0
HDAC4-204ENST00000446876 REXO2Q9Y3B8 237 aaKnown RBP15.06■□□□□ 0
HDAC4-204ENST00000446876 EPN1Q9Y6I3 576 aaPredicted RBP15.06■□□□□ 0
HDAC4-204ENST00000446876 ASCC3Q8N3C0 2202 aaKnown RBP15.05■□□□□ 0
HDAC4-204ENST00000446876 A0A1B0GVT2 93 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 RCCD1A6NED2 376 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 WNT9AO14904 365 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 GJB3O75712 270 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 MAP3K6O95382 1288 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 PIGNO95427 931 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 KRT7P08729 469 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 ITGB7P26010 798 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 ARHGAP25P42331 645 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 NOP2P46087 812 aaKnown RBP15.05■□□□□ -0
HDAC4-204ENST00000446876 CCR5P51681 352 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 NEK3P51956 506 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 LIMK1P53667 647 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 GRIK2Q13002 908 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 PUM1Q14671 1186 aaKnown RBP eCLIP15.05■□□□□ -0
HDAC4-204ENST00000446876 TCEAL1Q15170 157 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 UAP1L1Q3KQV9 507 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 ANKRD20A8PQ5CZ79 823 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 LRRC73Q5JTD7 316 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 NCBP2-AS2Q69YL0 99 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 TMTC1Q8IUR5 882 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 TMEM139Q8IV31 216 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 PLPP6Q8IY26 295 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 LZTR1Q8N653 840 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 KLK6Q92876 244 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 PPP1R16AQ96I34 528 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 KLHL32Q96NJ5 620 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 HDAC8Q9BY41 377 aa15.05■□□□□ -0
HDAC4-204ENST00000446876 RCOR3Q9P2K3 495 aaPredicted RBP15.05■□□□□ -0
HDAC4-204ENST00000446876 TRPM6Q9BX84 2022 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 A0A1W2PPC4 97 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 LRRD1A4D1F6 860 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 C16orf96A6NNT2 1141 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 ARHGAP33O14559 1287 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 MUSKO15146 869 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 BUB1BO60566 1050 aaPredicted RBP15.04■□□□□ -0
HDAC4-204ENST00000446876 RNGTTO60942 597 aaKnown RBP15.04■□□□□ -0
HDAC4-204ENST00000446876 PALMO75781 387 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 POP4O95707 220 aaKnown RBP15.04■□□□□ -0
HDAC4-204ENST00000446876 ADRB3P13945 408 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 COMTP21964 271 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 ABL2P42684 1182 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 IL10RBQ08334 325 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 PDK2Q15119 407 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 ZNF805Q5CZA5 627 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 MINDY1Q8N5J2 469 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 ATPAF2Q8N5M1 289 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 PQLC3Q8N755 202 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 TSEN2Q8NCE0 465 aaKnown RBP15.04■□□□□ -0
HDAC4-204ENST00000446876 LRRN4Q8WUT4 740 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 BAG1Q99933 345 aaPredicted RBP15.04■□□□□ -0
HDAC4-204ENST00000446876 MYOCQ99972 504 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 ZNF670Q9BS34 389 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 RTKNQ9BST9 563 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 ANP32EQ9BTT0 268 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 CINPQ9BW66 212 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms