RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	EPGN	Q6UW88	154 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	FAM35A	Q86V20	835 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	FLAD1	Q8NFF5	587 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	CYGB	Q8WWM9	190 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	ESAM	Q96AP7	390 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	HBEGF	Q99075	208 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	ULBP1	Q9BZM6	244 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	PSMD13	Q9UNM6	376 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	CDYL	Q9Y232	598 aa		12.7	□□□□□ -0.38
DDR1-238	ENST00000446312	ARHGEF37	A1IGU5	675 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	YJEFN3	A6XGL0	299 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	NFKBIE	O00221	500 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	IL18RAP	O95256	599 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	PTPN3	P26045	913 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	RPL14	P50914	215 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	TKTL1	P51854	596 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	SNAPC2	Q13487	334 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	C16orf72	Q14CZ0	275 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	RBM20	Q5T481	1227 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	WSCD1	Q658N2	575 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	SLC7A5P1	Q8MH63	180 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	CXorf38	Q8TB03	319 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	SH3RF2	Q8TEC5	729 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	PDCD6IP	Q8WUM4	868 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	SENP6	Q9GZR1	1112 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	POMK	Q9H5K3	350 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	PRMT7	Q9NVM4	692 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	PCDHB12	Q9Y5F1	795 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	PTPRF	P10586	1907 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	DLX3	O60479	287 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	SLC5A2	P31639	672 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	GRIA3	P42263	894 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	SOX4	Q06945	474 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	PPID	Q08752	370 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	PLCL1	Q15111	1095 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	KIF19	Q2TAC6	998 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	LDLRAP1	Q5SW96	308 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	ZNF362	Q5T0B9	420 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	FKBP1C	Q5VVH2	108 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	GPRIN1	Q7Z2K8	1008 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	RSPH1	Q8WYR4	309 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	LPGAT1	Q92604	370 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	SNX27	Q96L92	541 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	HAPLN3	Q96S86	360 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	RBBP8	Q99708	897 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	PIM2	Q9P1W9	311 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	EPS15L1	Q9UBC2	864 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	CRYL1	Q9Y2S2	319 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	RGSL1	A5PLK6	1076 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	NCF1B	A6NI72	391 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	NCF1C	A8MVU1	366 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	TSPAN1	O60635	241 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	C22orf31	O95567	290 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	AHSG	P02765	367 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	LGALS2	P05162	132 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	FAM58BP	P0C7Q3	252 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	THRA	P10827	490 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	NCF1	P14598	390 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	POR	P16435	677 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	ME2	P23368	584 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	GRK2	P25098	689 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	SERPINB8	P50452	374 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	ZIK1	Q3SY52	487 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	ZNF470	Q6ECI4	717 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	CNST	Q6PJW8	725 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	FAM47B	Q8NA70	645 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	OR6P1	Q8NGX9	317 aa		12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-238	ENST00000446312	HDAC3	O15379	428 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	GRID2	O43424	1007 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	NCK1	P16333	377 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	RPL5	P46777	297 aa	Known RBP	12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	BCAT1	P54687	386 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	SLC12A2	P55011	1212 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	NAA20	P61599	178 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	SULT2A1	Q06520	285 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	DALRD3	Q5D0E6	543 aa	Known RBP	12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	LPCAT2	Q7L5N7	544 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	SH3GL1	Q99961	368 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	MLPH	Q9BV36	600 aa	Predicted RBP	12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	FICD	Q9BVA6	458 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	SMARCAD1	Q9H4L7	1026 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	IGKV6D-21	A0A0A0MT36	114 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	TRIM64C	A6NLI5	447 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	MSI1	O43347	362 aa	Known RBP	12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	PABPC4L	P0CB38	370 aa	Known RBP	12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	PROZ	P22891	400 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	GABRB3	P28472	473 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	ECT2L	Q008S8	904 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	ADGRE1	Q14246	886 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	DPYSL2	Q16555	572 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	OSTM1	Q86WC4	334 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	RIN3	Q8TB24	985 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	DGCR14	Q96DF8	476 aa	Known RBP	12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	FAM167A	Q96KS9	214 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	LRRC40	Q9H9A6	602 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	ATAD3A	Q9NVI7	634 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	SELENON	Q9NZV5	590 aa		12.68	□□□□□ -0.38

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