RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SYN3O14994 580 aa17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 HSPA4LO95757 839 aa17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 CHRNGP07510 517 aa17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 NCF2P19878 526 aaPredicted RBP17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 ZC3HC1Q86WB0 502 aaKnown RBP17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 CEP97Q8IW35 865 aa17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 PPP4R1Q8TF05 950 aa17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 TSGA13Q96PP4 275 aa17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 RAB3IPQ96QF0 476 aaPredicted RBP17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 UXTQ9UBK9 157 aaPredicted RBP17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 RUVBL2Q9Y230 463 aaKnown RBP17.02■□□□□ 0.32
LAPTM4B-201ENST00000445593 KLF11O14901 512 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 RAMP2O60895 175 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 SNNO75324 88 aaPredicted RBP17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 GM2AP17900 193 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 ARNTP27540 789 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 RPS24P62847 133 aaKnown RBP17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 GALNT3Q14435 633 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 WDR75Q8IWA0 830 aaKnown RBP17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 MFSD6LQ8IWD5 586 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 LZTR1Q8N653 840 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 ZNF781Q8N8C0 355 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 ATP6V0D2Q8N8Y2 350 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 OR7D4Q8NG98 312 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 CLPTM1LQ96KA5 538 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 SMIM14Q96QK8 99 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 TTPALQ9BTX7 342 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 CADM1Q9BY67 442 aaKnown RBP17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 NMRAL1Q9HBL8 299 aa17.02■□□□□ 0.31
LAPTM4B-201ENST00000445593 TGDSO95455 350 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 GLDCP23378 1020 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 BFSP2Q13515 415 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 CNSTQ6PJW8 725 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 SCML4Q8N228 414 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 PIWIL2Q8TC59 973 aaKnown RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 BLOC1S5Q8TDH9 187 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 ACMSDQ8TDX5 336 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 WWP1Q9H0M0 922 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 MKS1Q9NXB0 559 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 NKX1-2Q9UD57 310 aaPredicted RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 NYNRINQ9P2P1 1898 aaKnown RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 SCN5AQ14524 2016 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 B2RBV5 119 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 ZMPSTE24O75844 475 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 SERPINE1P05121 402 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 PTPN4P29074 926 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 VEGFBP49765 207 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 ZNF135P52742 658 aaPredicted RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 CBLBQ13191 982 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 RBM20Q5T481 1227 aaKnown RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 PDPK2PQ6A1A2 396 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 NADSYN1Q6IA69 706 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 TIGD7Q6NT04 549 aaPredicted RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 RPS27LQ71UM5 84 aaKnown RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 DENND1CQ8IV53 801 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 CCNYL1Q8N7R7 359 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 FBXO22Q8NEZ5 403 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 ZNF398Q8TD17 642 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 CYP2S1Q96SQ9 504 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 KIFC1Q9BW19 673 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 RNF208Q9H0X6 261 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 HIPK3Q9H422 1215 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 TCAF1Q9Y4C2 921 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 LOC100653049A0A140TA62 436 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 E9PBE3 544 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 KLHL41O60662 606 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 KRT34O76011 436 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 HOXC13P31276 330 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 SKIV2L2P42285 1042 aaKnown RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 ALDH7A1P49419 539 aaKnown RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 RASSF2P50749 326 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 PLK1P53350 603 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 CFAP157Q5JU67 520 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 C16orf59Q7L2K0 433 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 APBB2Q92870 758 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 SORT1Q99523 831 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 SEMA3CQ99985 751 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 CYP4F12Q9HCS2 524 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 KCNK4Q9NYG8 393 aa17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.01■□□□□ 0.31
LAPTM4B-201ENST00000445593 A0A0U1RQS6 177 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 FAM95CA0A1B0GW59 222 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 NEMP2A6NFY4 417 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 TMEM189-UBE2V1I3L0A0 370 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 BIRC5O15392 142 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 TIMM44O43615 452 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 SPATA31D3P0C874 917 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 TAF12Q16514 161 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 SPATA31D4Q6ZUB0 917 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 MAVSQ7Z434 540 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 NPAS4Q8IUM7 802 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 OR52K2Q8NGK3 314 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 NXNL1Q96CM4 212 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 HHIPL1Q96JK4 782 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 TSNARE1Q96NA8 513 aa17■□□□□ 0.31
LAPTM4B-201ENST00000445593 DENND2DQ9H6A0 471 aaPredicted RBP17■□□□□ 0.31
LAPTM4B-201ENST00000445593 MAGEB16A2A368 324 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms