RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 METAP1P53582 386 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 LRRC38Q5VT99 294 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 DCAF12L1Q5VU92 463 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 OR2AP1Q8NGE2 309 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 OR6K2Q8NGY2 324 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 OR14C36Q8NHC7 312 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 SNX19Q92543 992 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 RAPGEF5Q92565 580 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 PPP1R16AQ96I34 528 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 GDAP1L1Q96MZ0 367 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 DESI2Q9BSY9 194 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 C6orf106Q9H6K1 298 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-207ENST00000445181 IPO11Q9UI26 975 aaKnown RBP24.34■■□□□ 1.49
C9orf3-207ENST00000445181 ALG6Q9Y672 507 aa24.34■■□□□ 1.49
C9orf3-207ENST00000445181 LRRC72A6NJI9 287 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 KRIT1O00522 736 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 PALMO75781 387 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 IGSF6O95976 241 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 KDELR1P24390 212 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 MAOBP27338 520 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 DRD3P35462 400 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 ATXN7L2Q5T6C5 722 aaPredicted RBP24.33■■□□□ 1.49
C9orf3-207ENST00000445181 N4BP2L1Q5TBK1 243 aaPredicted RBP24.33■■□□□ 1.49
C9orf3-207ENST00000445181 ARHGAP36Q6ZRI8 547 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 DAAM2Q86T65 1068 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 TP53INP2Q8IXH6 220 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 PLPP6Q8IY26 295 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 PCDH19Q8TAB3 1148 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 CALR3Q96L12 384 aaKnown RBP24.33■■□□□ 1.49
C9orf3-207ENST00000445181 PCED1AQ9H1Q7 454 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 GOLPH3Q9H4A6 298 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 PDFQ9HBH1 243 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 CAPN10Q9HC96 672 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 DDX56Q9NY93 547 aaKnown RBP24.33■■□□□ 1.49
C9orf3-207ENST00000445181 WASF2Q9Y6W5 498 aa24.33■■□□□ 1.49
C9orf3-207ENST00000445181 METTL12A8MUP2 240 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 FSBPO95073 299 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 ATXN3P54252 364 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-207ENST00000445181 IL10RBQ08334 325 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 CCDC15Q0P6D6 951 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 CNTN1Q12860 1018 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 CYTH1Q15438 398 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 MYLK3Q32MK0 819 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 PSAPL1Q6NUJ1 521 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 C11orf63Q6NUN7 778 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 ATPAF2Q8N5M1 289 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 GTPBP2Q9BX10 602 aaKnown RBP24.32■■□□□ 1.48
C9orf3-207ENST00000445181 MAK16Q9BXY0 300 aaKnown RBP24.32■■□□□ 1.48
C9orf3-207ENST00000445181 MIR1-1HGQ9H1L0 117 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 SALL4Q9UJQ4 1053 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 DUSP10Q9Y6W6 482 aa24.32■■□□□ 1.48
C9orf3-207ENST00000445181 BTNL10A8MVZ5 291 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 POP4O95707 220 aaKnown RBP24.31■■□□□ 1.48
C9orf3-207ENST00000445181 GNSP15586 552 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 GKP32189 559 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 NOVA1P51513 510 aaKnown RBP24.31■■□□□ 1.48
C9orf3-207ENST00000445181 ADPRHP54922 357 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 RAD51Q06609 339 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 KIF5AQ12840 1032 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 NCBP2-AS2Q69YL0 99 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 NCEH1Q6PIU2 408 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 TPCN2Q8NHX9 752 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.31■■□□□ 1.48
C9orf3-207ENST00000445181 EXOC2Q96KP1 924 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 CINPQ9BW66 212 aaPredicted RBP24.31■■□□□ 1.48
C9orf3-207ENST00000445181 LACRTQ9GZZ8 138 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 SUSD2Q9UGT4 822 aa24.31■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3DA0A087WVF3 549 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3IA0A087WXS9 549 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3EA0A087X179 549 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3KA0A087X1G2 549 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3FA6NER0 549 aaPredicted RBP24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3LB9A6J9 549 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 PJA2O43164 708 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 SLC7A4O43246 635 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 PSTPIP1O43586 416 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 MFSD11O43934 449 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3HP0C7X1 549 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 PI4KAP42356 2102 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3GQ6DHY5 549 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3CQ6IPX1 549 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 TBC1D3Q8IZP1 549 aaPredicted RBP24.3■■□□□ 1.48
C9orf3-207ENST00000445181 CCDC112Q8NEF3 446 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 OR2T34Q8NGX1 318 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 NSMCE1Q8WV22 266 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 DNASE2BQ8WZ79 361 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 ARRDC3Q96B67 414 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 RNF25Q96BH1 459 aaPredicted RBP24.3■■□□□ 1.48
C9orf3-207ENST00000445181 FAF2Q96CS3 445 aa24.3■■□□□ 1.48
C9orf3-207ENST00000445181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.3■■□□□ 1.48
C9orf3-207ENST00000445181 CNOT1A5YKK6 2376 aaKnown RBP24.29■■□□□ 1.48
C9orf3-207ENST00000445181 ARHGAP33O14559 1287 aa24.29■■□□□ 1.48
C9orf3-207ENST00000445181 GIPC1O14908 333 aa24.29■■□□□ 1.48
C9orf3-207ENST00000445181 SYPP08247 313 aa24.29■■□□□ 1.48
C9orf3-207ENST00000445181 RFTN1Q14699 578 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-207ENST00000445181 PAFAH1B3Q15102 231 aaKnown RBP24.29■■□□□ 1.48
C9orf3-207ENST00000445181 TMCO4Q5TGY1 634 aa24.29■■□□□ 1.48
C9orf3-207ENST00000445181 AGBL4Q5VU57 503 aa24.29■■□□□ 1.48
C9orf3-207ENST00000445181 KIAA0895LQ68EN5 471 aa24.29■■□□□ 1.48
C9orf3-207ENST00000445181 ERN2Q76MJ5 926 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms