RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 GPR22Q99680 433 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 VN1R3Q9BXE9 311 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 SAR1AQ9NR31 198 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 MKI67P46013 3256 aaKnown RBP13.85□□□□□ -0.19
RBM39-216ENST00000444878 C2orf71A6NGG8 1288 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 HAUS5O94927 633 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 PRKCGP05129 697 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 KRT16P08779 473 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 CPA3P15088 417 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 SAT1P21673 171 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 ACVRL1P37023 503 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 ETFBP38117 255 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 ARCN1P48444 511 aaKnown RBP13.85□□□□□ -0.19
RBM39-216ENST00000444878 HECTD3Q5T447 861 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 CNTN4Q8IWV2 1026 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 CFAP52Q8N1V2 620 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 MYEOVQ96EZ4 313 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 TMEM237Q96Q45 408 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 ARNT2Q9HBZ2 717 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 FBXO6Q9NRD1 293 aaPredicted RBP13.85□□□□□ -0.19
RBM39-216ENST00000444878 TREX1Q9NSU2 369 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 SLC2A6Q9UGQ3 507 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 AFF4Q9UHB7 1163 aaKnown RBP13.85□□□□□ -0.19
RBM39-216ENST00000444878 TLK1Q9UKI8 766 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 STK38LQ9Y2H1 464 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 NUMBLQ9Y6R0 609 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 HEATR9A2RTY3 570 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 ZNF840PA6NDX5 716 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 ACSL4O60488 711 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 DNAJC6O75061 913 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 GJB5O95377 273 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 AHSGP02765 367 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 SERPINE1P05121 402 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 T-ENOLP0DO92 83 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 GRK2P25098 689 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 SLC1A6P48664 564 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 SLC11A2P49281 568 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 SERPINH1P50454 418 aaKnown RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 IRF9Q00978 393 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 CTBP1Q13363 440 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 USP10Q14694 798 aaKnown RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 LBRQ14739 615 aaKnown RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 SNCBQ16143 134 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 CNKSR3Q6P9H4 555 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 RFWD3Q6PCD5 774 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 CLEC14AQ86T13 490 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 DENND6AQ8IWF6 608 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 RNF168Q8IYW5 571 aaPredicted RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 TNS4Q8IZW8 715 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 ACVR1CQ8NER5 493 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 ZNF461Q8TAF7 563 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 OVCA2Q8WZ82 227 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 CLSTN3Q9BQT9 956 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 WWP1Q9H0M0 922 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 LRMDAQ9H2I8 198 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 SEC24AO95486 1093 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 MMP2P08253 660 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 RALBP11234 206 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 ARNTP27540 789 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 GABRB3P28472 473 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 NUMBP49757 651 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 AQP5P55064 265 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 MPP1Q00013 466 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 CDK18Q07002 472 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 SLC20A2Q08357 652 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 TAF12Q16514 161 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 CTC1Q2NKJ3 1217 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 SNX30Q5VWJ9 437 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 KIAA0930Q6ICG6 404 aaPredicted RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 WDR75Q8IWA0 830 aaKnown RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 PIWIL2Q8TC59 973 aaKnown RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 PPP4R1Q8TF05 950 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 INPP5DQ92835 1189 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 TMEM169Q96HH4 297 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 TSNARE1Q96NA8 513 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 RAB3IPQ96QF0 476 aaPredicted RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 TUBB6Q9BUF5 446 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 NMRAL1Q9HBL8 299 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 ATP13A1Q9HD20 1204 aa13.84□□□□□ -0.19
RBM39-216ENST00000444878 UXTQ9UBK9 157 aaPredicted RBP13.84□□□□□ -0.19
RBM39-216ENST00000444878 TTC24A2A3L6 582 aaPredicted RBP13.83□□□□□ -0.2
RBM39-216ENST00000444878 ITM2AO43736 263 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 HNRNPCL1O60812 293 aaKnown RBP13.83□□□□□ -0.2
RBM39-216ENST00000444878 PRAMEF11O60813 436 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 LYPLA1O75608 230 aaPredicted RBP13.83□□□□□ -0.2
RBM39-216ENST00000444878 SOD2P04179 222 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 SLC6A4P31645 630 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 ALDH1A3P47895 512 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 TNK2Q07912 1038 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 ITGA9Q13797 1035 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 ZNF235Q14590 738 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 ARMC3Q5W041 872 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 KLHDC10Q6PID8 442 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 PGBD5Q8N414 524 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 POLR1EQ9GZS1 481 aaKnown RBP13.83□□□□□ -0.2
RBM39-216ENST00000444878 CYP4F11Q9HBI6 524 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 TRPM5Q9NZQ8 1165 aa13.83□□□□□ -0.2
RBM39-216ENST00000444878 ANKRD6Q9Y2G4 727 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms