RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DNAJB1P25685 340 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 ACVRL1P37023 503 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 SCTRP47872 440 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 TMPRSS15P98073 1019 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 ZNF177Q13360 481 aaPredicted RBP15.87■□□□□ 0.13
SNX13-204ENST00000444712 SPDYAQ5MJ70 313 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 RFWD3Q6PCD5 774 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 ZNF783Q6ZMS7 281 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 KIAA0408Q6ZU52 694 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 C10orf82Q8WW14 230 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 VPS39Q96JC1 886 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 MCMBPQ9BTE3 642 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 TREX1Q9NSU2 369 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 SEPT3Q9UH03 358 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 STOML2Q9UJZ1 356 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 TYW5A2RUC4 315 aaKnown RBP15.87■□□□□ 0.13
SNX13-204ENST00000444712 DNAJC8O75937 253 aaPredicted RBP15.87■□□□□ 0.13
SNX13-204ENST00000444712 EPOP01588 193 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 RHOCP08134 193 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 MMP2P08253 660 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 CES1P23141 567 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 OXCT1P55809 520 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 MAXP61244 160 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 DSC2Q02487 901 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 SEPT6Q14141 434 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 N4BP2L1Q5TBK1 243 aaPredicted RBP15.87■□□□□ 0.13
SNX13-204ENST00000444712 IL31Q6EBC2 164 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 CFAP52Q8N1V2 620 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 MICALL1Q8N3F8 863 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 ARRDC2Q8TBH0 407 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 SREK1Q8WXA9 508 aaKnown RBP15.87■□□□□ 0.13
SNX13-204ENST00000444712 PTPRN2Q92932 1015 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 PEX13Q92968 403 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 IFT43Q96FT9 208 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 FEM1CQ96JP0 617 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 TSNARE1Q96NA8 513 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 GPR22Q99680 433 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 RASSF4Q9H2L5 321 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 ALG13Q9NP73 1137 aaKnown RBP15.87■□□□□ 0.13
SNX13-204ENST00000444712 CAPN7Q9Y6W3 813 aa15.87■□□□□ 0.13
SNX13-204ENST00000444712 KDELR3O43731 214 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 PLIN3O60664 434 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 FGF1P05230 155 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 APOA4P06727 396 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 SERPINF2P08697 491 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 CTSAP10619 480 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 MBL2P11226 248 aaPredicted RBP15.86■□□□□ 0.13
SNX13-204ENST00000444712 ITGB8P26012 769 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 CDK18Q07002 472 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 LMNTD2Q8IXW0 634 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 FIBCD1Q8N539 461 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 PPP1R14CQ8TAE6 165 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 LRRC37BQ96QE4 947 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 ZBP1Q9H171 429 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 NPHS2Q9NP85 383 aa15.86■□□□□ 0.13
SNX13-204ENST00000444712 UBA2Q9UBT2 640 aaPredicted RBP15.86■□□□□ 0.13
SNX13-204ENST00000444712 AGO1Q9UL18 857 aaKnown RBP15.86■□□□□ 0.13
SNX13-204ENST00000444712 LOC285095A0A1B0GVY8 99 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 H3BNC9 293 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 TEX28O15482 410 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 LILRB3O75022 631 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 ATP5HO75947 161 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 VAPBO95292 243 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 HOXD9P28356 352 aaPredicted RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 SKIV2L2P42285 1042 aaKnown RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 CHI3L2Q15782 390 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 GALNTL6Q49A17 601 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 TAF1BQ53T94 588 aaPredicted RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 TSTD2Q5T7W7 516 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 ESRP1Q6NXG1 681 aaKnown RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 CCDC149Q6ZUS6 474 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 TMCO2Q7Z6W1 182 aaPredicted RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 ZC3HC1Q86WB0 502 aaKnown RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 SLC25A41Q8N5S1 370 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 MYEOVQ96EZ4 313 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 RMDN2Q96LZ7 410 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 PRICKLE1Q96MT3 831 aaPredicted RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 ZNF778Q96MU6 729 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 SEMA3CQ99985 751 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 MGME1Q9BQP7 344 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 CINPQ9BW66 212 aaPredicted RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 TBC1D30Q9Y2I9 924 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 MTO1Q9Y2Z2 717 aaKnown RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 A0A096LPK6 155 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 C2orf78A6NCI8 922 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 FGF18O76093 207 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 UBOX5O94941 541 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 F11P03951 625 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 KLKB1P03952 638 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 ARCN1P48444 511 aaKnown RBP15.85■□□□□ 0.13
SNX13-204ENST00000444712 PPIGQ13427 754 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■■■□□ 18.3
SNX13-204ENST00000444712 GALNT7Q86SF2 657 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 PGBD5Q8N414 524 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 SIKE1Q9BRV8 207 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 TMEM106CQ9BVX2 250 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 RNF38Q9H0F5 515 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 TLK1Q9UKI8 766 aa15.85■□□□□ 0.13
SNX13-204ENST00000444712 OLFM2O95897 454 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 PROCP04070 461 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 ACRP10323 421 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms