RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FATE1Q969F0 183 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 NKD2Q969F2 451 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-208ENST00000444533 PSKH2Q96QS6 385 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 TUBGCP5Q96RT8 1024 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 ATP13A3Q9H7F0 1226 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 SCUBE2Q9NQ36 999 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 FAM86C1Q9NVL1 165 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 SEPT10Q9P0V9 454 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 PPM1HQ9ULR3 514 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 INVSQ9Y283 1065 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 TTLL3Q9Y4R7 772 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 ACTL7AQ9Y615 435 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 MUC22E2RYF6 1773 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-208ENST00000444533 CKAP5Q14008 2032 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 A0A1W2PP55 124 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 HACD1B0YJ81 288 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 H7C0C1 242 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 DDX3YO15523 660 aaKnown RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 SLC7A4O43246 635 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 HRO43593 1189 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 LEFTY1O75610 366 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 STK10O94804 968 aaKnown RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 CD160O95971 181 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 CA4P22748 312 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 SERPINA4P29622 427 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 DPP6P42658 865 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 ATP5OP48047 213 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 CSNK1DP48730 415 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 SCNN1BP51168 640 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 AP1S1P61966 158 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 BCL2L1Q07817 233 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 PPIDQ08752 370 aaKnown RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 ZNF211Q13398 564 aaPredicted RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 MAP7D1Q3KQU3 841 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 RALGPS1Q5JS13 557 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 SPDYCQ5MJ68 293 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 ATXN7L2Q5T6C5 722 aaPredicted RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 FBXL19Q6PCT2 694 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 GDPD4Q6W3E5 623 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 TP53INP2Q8IXH6 220 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 TSEN2Q8NCE0 465 aaKnown RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 OR6K2Q8NGY2 324 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 MAIP1Q8WWC4 291 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 TOE1Q96GM8 510 aaKnown RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 EXOC2Q96KP1 924 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 CPEB1Q9BZB8 566 aaKnown RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 POLR1EQ9GZS1 481 aaKnown RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 CARD9Q9H257 536 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 EPC1Q9H2F5 836 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 RBM22Q9NW64 420 aaKnown RBP eCLIP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 EVLQ9UI08 416 aaPredicted RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 GMEB2Q9UKD1 530 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 TPX2Q9ULW0 747 aaKnown RBP14.3□□□□□ -0.12
SSBP3-208ENST00000444533 CHD5Q8TDI0 1954 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 NUP205Q92621 2012 aa14.3□□□□□ -0.12
SSBP3-208ENST00000444533 IGHV1OR15-9A0A0B4J2B8 117 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 IGLV3-19P01714 112 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 LMNAP02545 664 aaKnown RBP14.29□□□□□ -0.12
SSBP3-208ENST00000444533 ITGB7P26010 798 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 TNNT3P45378 269 aaPredicted RBP14.29□□□□□ -0.12
SSBP3-208ENST00000444533 NEK3P51956 506 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 NHLH1Q02575 133 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 SLC10A7Q0GE19 358 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 SLC10A2Q12908 348 aaPredicted RBP14.29□□□□□ -0.12
SSBP3-208ENST00000444533 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
SSBP3-208ENST00000444533 XRCC4Q13426 336 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 POM121L1PQ3SYA9 428 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 NPNTQ6UXI9 565 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.29□□□□□ -0.12
SSBP3-208ENST00000444533 SRLQ86TD4 932 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 ZC3H18Q86VM9 953 aaKnown RBP14.29□□□□□ -0.12
SSBP3-208ENST00000444533 REXO1L1PQ8IX06 675 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 CHST14Q8NCH0 376 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 OR14C36Q8NHC7 312 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 ZNF641Q96N77 438 aaPredicted RBP14.29□□□□□ -0.12
SSBP3-208ENST00000444533 LGMNQ99538 433 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 HINFPQ9BQA5 517 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 PCED1AQ9H1Q7 454 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 KDM4CQ9H3R0 1056 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 NT5MQ9NPB1 228 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 LHX3Q9UBR4 397 aa14.29□□□□□ -0.12
SSBP3-208ENST00000444533 SMG5Q9UPR3 1016 aaKnown RBP14.29□□□□□ -0.12
SSBP3-208ENST00000444533 A0A1W2PQ67 120 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 FAM47DPA6NHR8 397 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 MEI4A8MW99 385 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 NEMP1O14524 444 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 ZNF821O75541 412 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 SEMA4FO95754 770 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 UGT2B4P06133 528 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 C7P10643 843 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 DHPSP49366 369 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 POLR2LP62875 67 aaKnown RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 WDR45BQ5MNZ6 344 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 LAIR1Q6GTX8 287 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 ERN2Q76MJ5 926 aaKnown RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 CDKL3Q8IVW4 592 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 NDUFAF2Q8N183 169 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 FAM160A2Q8N612 972 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms