RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 IFT80Q9P2H3 777 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 GABBR1Q9UBS5 961 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 KCNN3Q9UGI6 736 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 RUVBL2Q9Y230 463 aaKnown RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 TESMINQ9Y4I5 508 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MEGF6O75095 1541 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 UBE2QL1A1L167 161 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 C2orf71A6NGG8 1288 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 GSG1L2A8MUP6 293 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 SOAT2O75908 522 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 TDP2O95551 362 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 ITGB3P05106 788 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 C8BP07358 591 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MAZP56270 477 aaKnown RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 CD83Q01151 205 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MVKQ03426 396 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 RAB39AQ14964 217 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 EPHA7Q15375 998 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 SKIV2LQ15477 1246 aaKnown RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 NFIL3Q16649 462 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 EPHA10Q5JZY3 1008 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 HGSNATQ68CP4 663 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 UGT2A3Q6UWM9 527 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 ZC3H7AQ8IWR0 971 aaKnown RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 PARP8Q8N3A8 854 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 TCEAL3Q969E4 200 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 ULK4Q96C45 1275 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MASTLQ96GX5 879 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 VCPIP1Q96JH7 1222 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 CTRCQ99895 268 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 KIFC1Q9BW19 673 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 SENP6Q9GZR1 1112 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 TMEM161AQ9NX61 479 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 DPP3Q9NY33 737 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MRPL11Q9Y3B7 192 aaKnown RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MAB21L2Q9Y586 359 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 CEPT1Q9Y6K0 416 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MED1Q15648 1581 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 KLF11O14901 512 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MYL12BO14950 172 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 FAM189A1O60320 539 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 DNAJA2O60884 412 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 RECQL5O94762 991 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 ALX3O95076 343 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 RBP1P09455 135 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 RHBDL3P58872 404 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 PRKD1Q15139 912 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 USF2Q15853 346 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 TPRG1LQ5T0D9 272 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 FNBP1LQ5T0N5 605 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 PYHIN1Q6K0P9 492 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 APTXQ7Z2E3 356 aaKnown RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 NLRX1Q86UT6 975 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 BPHLQ86WA6 291 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 IRF2BP1Q8IU81 584 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 ATP6V0D2Q8N8Y2 350 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 SLC4A11Q8NBS3 891 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 LPGAT1Q92604 370 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 CPNE1Q99829 537 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 C1QTNF1Q9BXJ1 281 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 FSD1LQ9BXM9 530 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 RACGAP1Q9H0H5 632 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MMP27Q9H306 513 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 SYTL2Q9HCH5 934 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 SALL4Q9UJQ4 1053 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 EFCAB9A8MZ26 197 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 OR2B3O76000 313 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 PIGNO95427 931 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 SGPL1O95470 568 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 CYP11B1P15538 503 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 MZF1P28698 734 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 RORAP35398 523 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 BCAMP50895 628 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 AP3M2P53677 418 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 DEFA5Q01523 94 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 NFATC3Q12968 1075 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 STK11Q15831 433 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 HLFQ16534 295 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 DCAF6Q58WW2 860 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 CACHD1Q5VU97 1274 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 AGAP7PQ5VUJ5 663 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 ARSKQ6UWY0 536 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 PID1Q7Z2X4 250 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 PTAR1Q7Z6K3 402 aaPredicted RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 LRRC47Q8N1G4 583 aaKnown RBP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 DEPDC4Q8N2C3 294 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 RDH11Q8TC12 318 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 NRG4Q8WWG1 115 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 SLC4A9Q96Q91 983 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 DHRS9Q9BPW9 319 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 BCL7BQ9BQE9 202 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 KATNAL1Q9BW62 490 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 PIGUQ9H490 435 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 LRRC4CQ9HCJ2 640 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 TMEM8AQ9HCN3 771 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCN11A-202ENST00000444237 TRPM5Q9NZQ8 1165 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 EBF1Q9UH73 591 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 UBQLN2Q9UHD9 624 aa5.2□□□□□ -1.58
SCN11A-202ENST00000444237 DNPEPQ9ULA0 475 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms