RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 CD151P48509 253 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SLC25A52Q3SY17 297 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SGO1Q5FBB7 561 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 ZNF484Q5JVG2 852 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SLC27A1Q6PCB7 646 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 DNAJC14Q6Y2X3 702 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SETD3Q86TU7 594 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SPPL2CQ8IUH8 684 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SLC45A3Q96JT2 553 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 KLHL5Q96PQ7 755 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 PNPLA8Q9NP80 782 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SFMBT1Q9UHJ3 866 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 FAM50BQ9Y247 325 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SF3B1O75533 1304 aaKnown RBP eCLIP11.78□□□□□ -0.524e-7■■■■■ 40.1
HCFC1-203ENST00000444191 SLX4Q8IY92 1834 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 CCNT2O60583 730 aaKnown RBP11.78□□□□□ -0.52
HCFC1-203ENST00000444191 POMCP01189 267 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 NFKBIAP25963 317 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 EEF1DP29692 281 aaKnown RBP11.78□□□□□ -0.52
HCFC1-203ENST00000444191 GRIA2P42262 883 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 ADGRE1Q14246 886 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SDHAF4Q5VUM1 108 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 GPR107Q5VW38 600 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SLC26A9Q7LBE3 791 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 ZFP28Q8NHY6 868 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SLC10A4Q96EP9 437 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SOX17Q9H6I2 414 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-203ENST00000444191 SP110Q9HB58 689 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 MID1IP1Q9NPA3 183 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 RRN3Q9NYV6 651 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 NDUFA13Q9P0J0 144 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 GMPR2Q9P2T1 348 aaKnown RBP11.78□□□□□ -0.52
HCFC1-203ENST00000444191 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
HCFC1-203ENST00000444191 NRP1O14786 923 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 BNIP3LO60238 219 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 TRMUO75648 421 aaKnown RBP11.77□□□□□ -0.52
HCFC1-203ENST00000444191 C22orf31O95567 290 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 PFKMP08237 780 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 CCR1P32246 355 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 ICAM3P32942 547 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 MAGEA10P43363 369 aaPredicted RBP11.77□□□□□ -0.52
HCFC1-203ENST00000444191 MTTPP55157 894 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 MYBPC3Q14896 1274 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 CYP51A1Q16850 503 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 PFKFB4Q16877 469 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 MYLK3Q32MK0 819 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 C9orf57Q5W0N0 161 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 NEPROQ6NW34 567 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 GRIN3AQ8TCU5 1115 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 SKA2Q8WVK7 121 aaPredicted RBP11.77□□□□□ -0.52
HCFC1-203ENST00000444191 BHMTQ93088 406 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 RMDN1Q96DB5 314 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 GAD1Q99259 594 aa11.77□□□□□ -0.52
HCFC1-203ENST00000444191 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.77□□□□□ -0.52
HCFC1-203ENST00000444191 COPG1Q9Y678 874 aaKnown RBP11.77□□□□□ -0.52
HCFC1-203ENST00000444191 WNK3Q9BYP7 1800 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 OR51F1A6NGY5 319 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 ASB14A6NK59 587 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 SCAMP3O14828 347 aaKnown RBP11.77□□□□□ -0.53
HCFC1-203ENST00000444191 DLX3O60479 287 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 RNASEH2AO75792 299 aaKnown RBP11.77□□□□□ -0.53
HCFC1-203ENST00000444191 ENDOD1O94919 500 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 CD4P01730 458 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 AHSGP02765 367 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 NPR3P17342 541 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 TKTP29401 623 aaKnown RBP11.77□□□□□ -0.53
HCFC1-203ENST00000444191 PSMD7P51665 324 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 CCR3P51677 355 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.53
HCFC1-203ENST00000444191 VPS26BQ4G0F5 336 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 LDLRAP1Q5SW96 308 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 EPGNQ6UW88 154 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 RNF111Q6ZNA4 994 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 GABPB2Q8TAK5 448 aaPredicted RBP11.77□□□□□ -0.53
HCFC1-203ENST00000444191 NCLNQ969V3 563 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 B3GALT6Q96L58 329 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 EML4Q9HC35 981 aaKnown RBP11.77□□□□□ -0.53
HCFC1-203ENST00000444191 UBAP1Q9NZ09 502 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 SUN2Q9UH99 717 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 FBXO5Q9UKT4 447 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 SMIM28A0A1B0GU29 152 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.77□□□□□ -0.53
HCFC1-203ENST00000444191 HACD1B0YJ81 288 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 AGRPO00253 132 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 CLOCKO15516 846 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 E2F6O75461 281 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 PPP1R8Q12972 351 aaKnown RBP11.77□□□□□ -0.53
HCFC1-203ENST00000444191 ZBTB17Q13105 803 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 RBBP7Q16576 425 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 SV2CQ496J9 727 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 CNSTQ6PJW8 725 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 ARHGAP36Q6ZRI8 547 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 PLPPR4Q7Z2D5 763 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 TMEM110Q86TL2 294 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 PCYOX1LQ8NBM8 494 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 HEXDCQ8WVB3 486 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 IFT43Q96FT9 208 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 C1orf21Q9H246 121 aa11.77□□□□□ -0.53
HCFC1-203ENST00000444191 SEMA4BQ9NPR2 832 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms