RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 PDE1CQ14123 709 aaPredicted RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 SMAD1Q15797 465 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 SLC14A2Q15849 920 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 PABPC1LQ4VXU2 614 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 HSP90AA5PQ58FG0 334 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 STXBP5Q5T5C0 1151 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 GKAP1Q5VSY0 366 aaPredicted RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 RNF43Q68DV7 783 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 ESRP1Q6NXG1 681 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 PSRC1Q6PGN9 363 aaPredicted RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 ZNF783Q6ZMS7 281 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 MICALCLQ6ZW33 695 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 YTHDF3Q7Z739 585 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 SETD3Q86TU7 594 aaPredicted RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 TAX1BP1Q86VP1 789 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 KCNMB4Q86W47 210 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 CNTN4Q8IWV2 1026 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 CACNA2D3Q8IZS8 1091 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 MRPL43Q8N983 215 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 CCDC197Q8NCU1 140 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 KREMEN2Q8NCW0 462 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 ACVR1CQ8NER5 493 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 ACMSDQ8TDX5 336 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 PTPRN2Q92932 1015 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 ALG14Q96F25 216 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 FAM111AQ96PZ2 611 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 TRIB3Q96RU7 358 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 SRPK1Q96SB4 655 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 RBBP8Q99708 897 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 PAIP2Q9BPZ3 127 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 DDX50Q9BQ39 737 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 MGME1Q9BQP7 344 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 IARS2Q9NSE4 1012 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 C20orf96Q9NUD7 363 aaPredicted RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 SMPD4Q9NXE4 827 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 DNMT3BQ9UBC3 853 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 SLC2A6Q9UGQ3 507 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 EMCNQ9ULC0 261 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 MTO1Q9Y2Z2 717 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 CPQQ9Y646 472 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 ATXN2Q99700 1313 aaKnown RBP8.68□□□□□ -1.02
RER1-205ENST00000443438 ALPK3Q96L96 1907 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 ANAPC1Q9H1A4 1944 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 CHD5Q8TDI0 1954 aa8.68□□□□□ -1.02
RER1-205ENST00000443438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 A0A1B0GVM2 712 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 LINC01553A4QN01 128 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 TCAF2A6NFQ2 919 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 MROH6A6NGR9 719 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 TPP1O14773 563 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 PAPSS2O95340 614 aaPredicted RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 TOP3BO95985 862 aaKnown RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 EPOP01588 193 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 C8AP07357 584 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 RHOCP08134 193 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 GABRR2P28476 465 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 ETFBP38117 255 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SERPINB4P48594 390 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SERPINH1P50454 418 aaKnown RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 CLCN4P51793 760 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 LIMK2P53671 638 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 EPHA5P54756 1037 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 OXCT1P55809 520 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 ARF5P84085 180 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 ITKQ08881 620 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 CAMK1Q14012 370 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 RFTN1Q14699 578 aaPredicted RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 POU6F1Q14863 301 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 PCSK7Q16549 785 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 FSCBQ5H9T9 825 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 PPM1JQ5JR12 505 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SIRPB2Q5JXA9 342 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 CES4AQ5XG92 561 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 PDPK2PQ6A1A2 396 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 KIAA0930Q6ICG6 404 aaPredicted RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 CCDC149Q6ZUS6 474 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 HTR3DQ70Z44 454 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 TMC7Q7Z402 723 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SPRED2Q7Z698 418 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 STRA8Q7Z7C7 330 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 CLEC14AQ86T13 490 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 CNPY4Q8N129 248 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 NDUFAF2Q8N183 169 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 DCLK2Q8N568 766 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SLC25A41Q8N5S1 370 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 PPHLN1Q8NEY8 458 aaKnown RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 SLC22A17Q8WUG5 538 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 NSMCE1Q8WV22 266 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 FEM1CQ96JP0 617 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 PSKH2Q96QS6 385 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SEMA3CQ99985 751 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 TCF25Q9BQ70 676 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 ZBED2Q9BTP6 218 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SPON2Q9BUD6 331 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SLC46A2Q9BY10 475 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 SLC13A1Q9BZW2 595 aa8.67□□□□□ -1.02
RER1-205ENST00000443438 POLR1EQ9GZS1 481 aaKnown RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 NSRP1Q9H0G5 558 aaKnown RBP8.67□□□□□ -1.02
RER1-205ENST00000443438 PLXNA4Q9HCM2 1894 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms