RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 FAM193AP78312 1265 aa21.4■■□□□ 1.02
CDKN3-204ENST00000442975 PRAMEF14Q5SWL7 426 aa21.4■■□□□ 1.02
CDKN3-204ENST00000442975 HORMAD1Q86X24 394 aa21.4■■□□□ 1.02
CDKN3-204ENST00000442975 PSTKQ8IV42 348 aaKnown RBP21.4■■□□□ 1.02
CDKN3-204ENST00000442975 LRRC19Q9H756 370 aa21.4■■□□□ 1.02
CDKN3-204ENST00000442975 FZD3Q9NPG1 666 aa21.4■■□□□ 1.02
CDKN3-204ENST00000442975 GDF3Q9NR23 364 aa21.4■■□□□ 1.02
CDKN3-204ENST00000442975 UBA2Q9UBT2 640 aaPredicted RBP21.4■■□□□ 1.02
CDKN3-204ENST00000442975 DMTF1Q9Y222 760 aa21.4■■□□□ 1.02
CDKN3-204ENST00000442975 CA5BQ9Y2D0 317 aa21.4■■□□□ 1.02
CDKN3-204ENST00000442975 A0A1W2PR77 199 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 DFFAO00273 331 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 CYP1A2P05177 515 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 ERCC2P18074 760 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 IL1R2P27930 398 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 NDST2P52849 883 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 PIGHQ14442 188 aaPredicted RBP21.39■■□□□ 1.01
CDKN3-204ENST00000442975 MYLK3Q32MK0 819 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 SEL1L3Q68CR1 1132 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 VSTM4Q8IW00 320 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 NPWQ8N729 165 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 CASKIN2Q8WXE0 1202 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 ZNHIT6Q9NWK9 470 aaKnown RBP21.39■■□□□ 1.01
CDKN3-204ENST00000442975 IP6K2Q9UHH9 426 aa21.39■■□□□ 1.01
CDKN3-204ENST00000442975 ASCC3Q8N3C0 2202 aaKnown RBP21.39■■□□□ 1.01
CDKN3-204ENST00000442975 DOCK4Q8N1I0 1966 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 ARHGAP42A6NI28 874 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 PRAMEF26H0Y7S4 382 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 H3BRJ5 948 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 NEMP1O14524 444 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 PAPOLAP51003 745 aaKnown RBP21.38■■□□□ 1.01
CDKN3-204ENST00000442975 MAPK8IP2Q13387 824 aaPredicted RBP21.38■■□□□ 1.01
CDKN3-204ENST00000442975 HNRNPDQ14103 355 aaKnown RBP21.38■■□□□ 1.01
CDKN3-204ENST00000442975 STAT4Q14765 748 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 SUZ12Q15022 739 aaKnown RBP21.38■■□□□ 1.01
CDKN3-204ENST00000442975 ACAP1Q15027 740 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 ZNF423Q2M1K9 1284 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 TSR1Q2NL82 804 aaKnown RBP21.38■■□□□ 1.01
CDKN3-204ENST00000442975 ZNF284Q2VY69 593 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 PLPP6Q8IY26 295 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 OR8K1Q8NGG5 319 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 ZNF564Q8TBZ8 553 aaPredicted RBP21.38■■□□□ 1.01
CDKN3-204ENST00000442975 ELF4Q99607 663 aaPredicted RBP21.38■■□□□ 1.01
CDKN3-204ENST00000442975 DNAJC7Q99615 494 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 OSBPL1AQ9BXW6 950 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 SLC39A8Q9C0K1 460 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 SP110Q9HB58 689 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 CWC15Q9P013 229 aaKnown RBP21.38■■□□□ 1.01
CDKN3-204ENST00000442975 PCOLCE2Q9UKZ9 415 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 PCDHGB2Q9Y5G2 931 aa21.38■■□□□ 1.01
CDKN3-204ENST00000442975 C16orf96A6NNT2 1141 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 J3KR12 359 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 TLR4O00206 839 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 FLRT2O43155 660 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 POP4O95707 220 aaKnown RBP21.37■■□□□ 1.01
CDKN3-204ENST00000442975 HNRNPH3P31942 346 aaKnown RBP21.37■■□□□ 1.01
CDKN3-204ENST00000442975 GJC1P36383 396 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 ARL4AP40617 200 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 ZNF135P52742 658 aaPredicted RBP21.37■■□□□ 1.01
CDKN3-204ENST00000442975 NXPH1P58417 271 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 DPYSQ14117 519 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 TRIP6Q15654 476 aaKnown RBP21.37■■□□□ 1.01
CDKN3-204ENST00000442975 INO80DQ53TQ3 878 aaPredicted RBP21.37■■□□□ 1.01
CDKN3-204ENST00000442975 ZNF805Q5CZA5 627 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 LRRC73Q5JTD7 316 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 NEK5Q6P3R8 708 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 GDPD4Q6W3E5 623 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 CTNNBL1Q8WYA6 563 aaPredicted RBP21.37■■□□□ 1.01
CDKN3-204ENST00000442975 LRIG1Q96JA1 1093 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 KLHL32Q96NJ5 620 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 CNTNAP3BQ96NU0 1288 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 CNTNAP3Q9BZ76 1288 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 PDFQ9HBH1 243 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 ABHD10Q9NUJ1 306 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 CTTNBP2NLQ9P2B4 639 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 LHX3Q9UBR4 397 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 ITM2BQ9Y287 266 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 BTBD3Q9Y2F9 522 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 FADS3Q9Y5Q0 445 aa21.37■■□□□ 1.01
CDKN3-204ENST00000442975 MYO1FO00160 1098 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 PRAMEF11O60813 436 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 MFAP3LO75121 409 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 SPINK2P20155 84 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 AKT2P31751 481 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 ABL2P42684 1182 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 RAD51Q06609 339 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 KRT81Q14533 505 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 DPYSL2Q16555 572 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 SLC18A3Q16572 532 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 BOLA3Q53S33 107 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 TXNRD3NBQ6F5E7 133 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 ARHGAP12Q8IWW6 846 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 NIPA2Q8N8Q9 360 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 MFSD2AQ8NA29 543 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 RHBDD1Q8TEB9 315 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 PACSIN1Q9BY11 444 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 NENFQ9UMX5 172 aa21.36■■□□□ 1.01
CDKN3-204ENST00000442975 ZFR2Q9UPR6 939 aaKnown RBP21.36■■□□□ 1.01
CDKN3-204ENST00000442975 CEP295Q9C0D2 2601 aa21.35■■□□□ 1.01
CDKN3-204ENST00000442975 A0A1B0GTQ1 180 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms