RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ACSL1P33121 698 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 NR2C2P49116 596 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 RENBPP51606 427 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 RAD51Q06609 339 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 ADCY2Q08462 1091 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 NSUN2Q08J23 767 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP1-203ENST00000442679 CNTN1Q12860 1018 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 ZNF235Q14590 738 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 PDK1Q15118 436 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 SPDYCQ5MJ68 293 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 MARC1Q5VT66 337 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 PMS2CLQ68D20 193 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 LAIR1Q6GTX8 287 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 TIGD7Q6NT04 549 aaPredicted RBP12.51□□□□□ -0.41
USP1-203ENST00000442679 BBS5Q8N3I7 341 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 LRRN4Q8WUT4 740 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 ARRDC3Q96B67 414 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 HES6Q96HZ4 224 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 LRIG1Q96JA1 1093 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 ALS2CR12Q96Q35 445 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 PSKH2Q96QS6 385 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 BTBD1Q9H0C5 482 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 DYRK4Q9NR20 520 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 SAE1Q9UBE0 346 aaPredicted RBP12.51□□□□□ -0.41
USP1-203ENST00000442679 SERGEFQ9UGK8 458 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 FZD4Q9ULV1 537 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 VPS13AQ96RL7 3174 aa12.51□□□□□ -0.41
USP1-203ENST00000442679 PRR23AA6NEV1 266 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 INSIG1O15503 277 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 SEMA4FO95754 770 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 TGM2P21980 687 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 PTPN7P35236 360 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 DRD3P35462 400 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 MMP13P45452 471 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 RGRP47804 291 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 CSNK1DP48730 415 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 DHPSP49366 369 aaPredicted RBP12.5□□□□□ -0.41
USP1-203ENST00000442679 HNRNPDQ14103 355 aaKnown RBP12.5□□□□□ -0.41
USP1-203ENST00000442679 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 AADACL2Q6P093 401 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 GDPD4Q6W3E5 623 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 BBS12Q6ZW61 710 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 BZW1Q7L1Q6 419 aaKnown RBP12.5□□□□□ -0.41
USP1-203ENST00000442679 ARMCX6Q7L4S7 300 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 ASCL5Q7RTU5 278 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 SRLQ86TD4 932 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 TEX26Q8N6G2 289 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 FATE1Q969F0 183 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 PPP1R16AQ96I34 528 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 LOXL4Q96JB6 756 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 LGMNQ99538 433 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 OSBPL1AQ9BXW6 950 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 HDAC8Q9BY41 377 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 CPEB1Q9BZB8 566 aaKnown RBP12.5□□□□□ -0.41
USP1-203ENST00000442679 OSBPL8Q9BZF1 889 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 EFR3BQ9Y2G0 817 aa12.5□□□□□ -0.41
USP1-203ENST00000442679 CHD5Q8TDI0 1954 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 FAM47DPA6NHR8 397 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 LRRC72A6NJI9 287 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 PPP1R12AO14974 1030 aaPredicted RBP12.49□□□□□ -0.41
USP1-203ENST00000442679 MUSKO15146 869 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 SLC7A4O43246 635 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 UGT2B4P06133 528 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 RETP07949 1114 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 CCNB1P14635 433 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 PECAM1P16284 738 aaPredicted RBP12.49□□□□□ -0.41
USP1-203ENST00000442679 ITGB7P26010 798 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 HSPA9P38646 679 aaKnown RBP12.49□□□□□ -0.41
USP1-203ENST00000442679 PLA2G5P39877 138 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 PTGER3P43115 390 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 SCNN1BP51168 640 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 ZNF33AQ06730 810 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 PPIDQ08752 370 aaKnown RBP12.49□□□□□ -0.41
USP1-203ENST00000442679 CCDC15Q0P6D6 951 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 AP1B1Q10567 949 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 ZNF211Q13398 564 aaPredicted RBP12.49□□□□□ -0.41
USP1-203ENST00000442679 RPS6KA1Q15418 735 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 ZNF805Q5CZA5 627 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 CCDC181Q5TID7 509 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 ERN2Q76MJ5 926 aaKnown RBP12.49□□□□□ -0.41
USP1-203ENST00000442679 REXO1L1PQ8IX06 675 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 PGBD5Q8N414 524 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 CADM4Q8NFZ8 388 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 TRIM58Q8NG06 486 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 OR14C36Q8NHC7 312 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 MAML1Q92585 1016 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 P3H4Q92791 437 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 FOXJ1Q92949 421 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 VOPP1Q96AW1 172 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 HAUS1Q96CS2 278 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 ZNF419Q96HQ0 510 aaPredicted RBP12.49□□□□□ -0.41
USP1-203ENST00000442679 KLHL32Q96NJ5 620 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 OLFM3Q96PB7 478 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 HERPUD2Q9BSE4 406 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 BRD8Q9H0E9 1235 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 C6orf106Q9H6K1 298 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms