RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CFAP45Q9UL16 551 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 PADI1Q9ULC6 663 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 NENFQ9UMX5 172 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 SH2B3Q9UQQ2 575 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADGRF5Q8IZF2 1346 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 hCG_1809904A0A1W2PP81 198 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 A0A1W2PPE2 198 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 A0A1W2PR64 198 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 GLOD5A6NK44 160 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 PRYO14603 147 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KIAA0754O94854 1291 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 GGPS1O95749 300 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ONECUT2O95948 504 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 PRR35P0CG20 571 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 IFNAR1P17181 557 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 HOXB9P17482 250 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 FPR3P25089 353 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 EEF1DP29692 281 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 CAPZA2P47755 286 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 MFAP4P55083 255 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 NXPH1P58417 271 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 MRPS35P82673 323 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 RBP5P82980 135 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 DDR1Q08345 913 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 TFCP2Q12800 502 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ALG11Q2TAA5 492 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ASTE1Q2TB18 679 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ATG9BQ674R7 924 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 SHQ1Q6PI26 577 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KCNV1Q6PIU1 500 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 DCLRE1AQ6PJP8 1040 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 TSSK4Q6SA08 328 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KIRREL2Q6UWL6 708 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 Q6ZSN1 163 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KBTBD6Q86V97 674 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 DNAAF5Q86Y56 855 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 THNSL1Q8IYQ7 743 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 GHDCQ8N2G8 530 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 C12orf76Q8N812 135 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 EXD3Q8N9H8 876 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 SCAIQ8N9R8 606 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 C11orf65Q8NCR3 313 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 CPEB3Q8NE35 698 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 OR6J1Q8NGC5 347 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM110DQ8TAY7 271 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 SH3RF3Q8TEJ3 882 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ANKRD49Q8WVL7 239 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 RFKQ969G6 155 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM81BQ96LP2 452 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 SFXN1Q9H9B4 322 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 BABAM1Q9NWV8 329 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KIAA1456Q9P272 454 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZFP37Q9Y6Q3 630 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 PIK3R4Q99570 1358 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KIF21AQ7Z4S6 1674 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 GAGE12BA1L429 117 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 OR2A25A4D2G3 310 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 GAGE12HA6NDE8 117 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 UNC119BA6NIH7 251 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 PI4K2BG5E9Z4 385 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 RNASET2O00584 256 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 PSMD10O75832 226 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 CNTN5O94779 1100 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 NDUFA10O95299 355 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADAP00813 363 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 SFPQP23246 707 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 POU1F1P28069 291 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 PCSK6P29122 969 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 HIBADHP31937 336 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 BMPR1AP36894 532 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 LMAN1P49257 510 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 PMS2P54278 862 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 WDR5P61964 334 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 CRHR2Q13324 411 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 RUNX2Q13950 521 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KCNA10Q16322 511 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF628Q5EBL2 1059 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 C10orf76Q5T2E6 689 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ISM2Q6H9L7 571 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 PARS2Q7L3T8 475 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADPRHL1Q8NDY3 354 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 DNAAF1Q8NEP3 725 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF653Q96CK0 615 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 RMDN1Q96DB5 314 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM84AQ96KN4 292 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 TSGA13Q96PP4 275 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 FIZ1Q96SL8 496 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 NCAPGQ9BPX3 1015 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ALG8Q9BVK2 526 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KLC2Q9H0B6 622 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 OPA3Q9H6K4 179 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 KLC4Q9NSK0 619 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 ARL15Q9NXU5 204 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 DONSONQ9NYP3 566 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 MARCH4Q9P2E8 410 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 NLKQ9UBE8 527 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 CCL27Q9Y4X3 112 aa4.26□□□□□ -1.73
CDC42BPA-207ENST00000441725 FANCIQ9NVI1 1328 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 CFAP65Q6ZU64 1925 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms