RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 RANBP9Q96S59 729 aa17.24■□□□□ 0.35
TMEM39B-203ENST00000441402 SEMA3CQ99985 751 aa17.24■□□□□ 0.35
TMEM39B-203ENST00000441402 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.24■□□□□ 0.35
TMEM39B-203ENST00000441402 KIAA1522Q9P206 1035 aaPredicted RBP17.24■□□□□ 0.35
TMEM39B-203ENST00000441402 PRKAG3Q9UGI9 489 aa17.24■□□□□ 0.35
TMEM39B-203ENST00000441402 CCL26Q9Y258 94 aa17.24■□□□□ 0.35
TMEM39B-203ENST00000441402 CBX4O00257 560 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 CREB1P16220 341 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 TPH1P17752 444 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 GLDCP23378 1020 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 ADRA1DP25100 572 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 CNTFP26441 200 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 MZF1P28698 734 aaPredicted RBP17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 NTHL1P78549 312 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 MSLNQ13421 630 aaPredicted RBP17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 ZNF77Q15935 545 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 MFN1Q8IWA4 741 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 CTAGE3PQ8IX95 158 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 SRRM1Q8IYB3 904 aaKnown RBP17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 ACDQ96AP0 544 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 ALKBH8Q96BT7 664 aaKnown RBP17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 MRRFQ96E11 262 aaKnown RBP17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 CERS2Q96G23 380 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 FEM1CQ96JP0 617 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 CINPQ9BW66 212 aaPredicted RBP17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 TRABDQ9H4I3 376 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 CERS4Q9HA82 394 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 SLC28A3Q9HAS3 691 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 ATG2AQ2TAZ0 1938 aa17.23■□□□□ 0.35
TMEM39B-203ENST00000441402 SCAMP3O14828 347 aaKnown RBP17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 PRPF4O43172 522 aaKnown RBP eCLIP17.22■□□□□ 0.351e-5■■■■□ 19.3
TMEM39B-203ENST00000441402 PIAS1O75925 651 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 KRT37O76014 449 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 SERPINF2P08697 491 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 SNRPAP09012 282 aaKnown RBP17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 CHN1P15882 459 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 GUCY1A3Q02108 690 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 USP4Q13107 963 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 SLC1A5Q15758 541 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 RALGPS1Q5JS13 557 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 ZNF697Q5TEC3 545 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 LEKR1Q6ZMV7 388 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 ZNF557Q8N988 423 aaPredicted RBP17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 WFDC5Q8TCV5 224 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 SMG7Q92540 1137 aaKnown RBP17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 MTBPQ96DY7 904 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 LMLNQ96KR4 655 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 SMG9Q9H0W8 520 aaKnown RBP17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 PIDD1Q9HB75 910 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 CHRAC1Q9NRG0 131 aa17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 MRPS23Q9Y3D9 190 aaKnown RBP17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 ARIH1Q9Y4X5 557 aaPredicted RBP17.22■□□□□ 0.35
TMEM39B-203ENST00000441402 TMEM120BA0PK00 339 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 CCDC85CA6NKD9 419 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 KRT38O76015 456 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 PENKP01210 267 aaPredicted RBP17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 HLA-DPA1P20036 260 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 CSKP41240 450 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 NRIP1P48552 1158 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 SERPINH1P50454 418 aaKnown RBP17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 GNGT1P63211 74 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 SLC20A2Q08357 652 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 DNAJC3Q13217 504 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 TMEM184AQ6ZMB5 413 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 METTL3Q86U44 580 aaKnown RBP17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 RIN3Q8TB24 985 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 MDM1Q8TC05 714 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 ZNF669Q96BR6 464 aaPredicted RBP17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 MFSD3Q96ES6 412 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 ZSWIM3Q96MP5 696 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 NUDCD1Q96RS6 583 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 SMC6Q96SB8 1091 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 SELENOSQ9BQE4 189 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 C2orf49Q9BVC5 232 aaPredicted RBP17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 SFXN1Q9H9B4 322 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 KIF9Q9HAQ2 790 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 DZANK1Q9NVP4 752 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 VPS28Q9UK41 221 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 SMG5Q9UPR3 1016 aaKnown RBP17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 TCAF1Q9Y4C2 921 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 MIA3Q5JRA6 1907 aa17.21■□□□□ 0.35
TMEM39B-203ENST00000441402 A0A1W2PPM1 405 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 FOXO6A8MYZ6 492 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 INSIG1O15503 277 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 SNAP91O60641 907 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 PAPSS2O95340 614 aaPredicted RBP17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 CEBPBP17676 345 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 LSP1P33241 339 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 BMP8BP34820 402 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 CDK18Q07002 472 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 PCSK7Q16549 785 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 RETSATQ6NUM9 610 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 CES3Q6UWW8 571 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 TIFABQ6ZNK6 161 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 TPGS1Q6ZTW0 290 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 SH2D5Q6ZV89 423 aa17.21■□□□□ 0.34
TMEM39B-203ENST00000441402 UNC5BQ8IZJ1 945 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms