RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 DUX4L4P0CJ87 422 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 DUX4L5P0CJ88 424 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 DUX4L6P0CJ89 424 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 DUX4L7P0CJ90 424 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 RPL5P46777 297 aaKnown RBP13.02□□□□□ -0.32
BRPF3-203ENST00000441123 SLC18A1P54219 525 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.32
BRPF3-203ENST00000441123 C1DQ13901 141 aaKnown RBP13.02□□□□□ -0.32
BRPF3-203ENST00000441123 CCDC85BQ15834 202 aaPredicted RBP13.02□□□□□ -0.32
BRPF3-203ENST00000441123 ALYREFQ86V81 257 aaKnown RBP13.02□□□□□ -0.32
BRPF3-203ENST00000441123 CYP4Z2PQ8N1L4 340 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 ZNF276Q8N554 614 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 LGMNQ99538 433 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 UNKQ9C0B0 810 aaKnown RBP13.02□□□□□ -0.32
BRPF3-203ENST00000441123 MUC13Q9H3R2 512 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 ZDHHC18Q9NUE0 388 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 DUX4Q9UBX2 424 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 SFMBT1Q9UHJ3 866 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 DNMT3LQ9UJW3 386 aa13.02□□□□□ -0.32
BRPF3-203ENST00000441123 LRP6O75581 1613 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 TCRBV7S2A1N4TA0A589 114 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 ADSLP30566 484 aaPredicted RBP13.02□□□□□ -0.33
BRPF3-203ENST00000441123 SCNN1GP51170 649 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 TCEAL1Q15170 157 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 FNBP1LQ5T0N5 605 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 TTC23Q5W5X9 447 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 SH3BP5LQ7L8J4 393 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 ECHDC2Q86YB7 292 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 TMEM159Q96B96 161 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 CORO2BQ9UQ03 480 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 IRF6O14896 467 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 STAU1O95793 577 aaKnown RBP13.02□□□□□ -0.33
BRPF3-203ENST00000441123 IDO1P14902 403 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 S100A3P33764 101 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 INHBEP58166 350 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 CRADDP78560 199 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 SMARCB1Q12824 385 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 NCF4Q15080 339 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 TJAP1Q5JTD0 557 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 IL27RAQ6UWB1 636 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 PROSER1Q86XN7 944 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 KCTD4Q8WVF5 259 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 PHF21AQ96BD5 680 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 FAM136AQ96C01 138 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 MRPL48Q96GC5 212 aaKnown RBP13.02□□□□□ -0.33
BRPF3-203ENST00000441123 FBXO6Q9NRD1 293 aaPredicted RBP13.02□□□□□ -0.33
BRPF3-203ENST00000441123 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 TBKBP1A7MCY6 615 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 PKNOX1P55347 436 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 PLIN5Q00G26 463 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 CREMQ03060 361 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 DGUOKQ16854 277 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 CYP2R1Q6VVX0 501 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 C8orf59Q8N0T1 100 aaPredicted RBP13.02□□□□□ -0.33
BRPF3-203ENST00000441123 FTHL17Q9BXU8 183 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 SLC39A8Q9C0K1 460 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 DOLKQ9UPQ8 538 aa13.02□□□□□ -0.33
BRPF3-203ENST00000441123 TM7SF2O76062 418 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 CCDC159P0C7I6 412 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 CKBP12277 381 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PAX7P23759 505 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 SERPINA4P29622 427 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PPP2R1BP30154 601 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 FKBP1BP68106 108 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PABPC1LQ4VXU2 614 aaKnown RBP13.01□□□□□ -0.33
BRPF3-203ENST00000441123 USP45Q70EL2 814 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 CLYBLQ8N0X4 340 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 HOPXQ9BPY8 73 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-203ENST00000441123 IKZF4Q9H2S9 585 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PNPLA3Q9NST1 481 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 ARL8BQ9NVJ2 186 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 SNX6Q9UNH7 406 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 FAM220BPB1ANY3 271 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 RNASEH1O60930 286 aaKnown RBP13.01□□□□□ -0.33
BRPF3-203ENST00000441123 ARL4DP49703 201 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 ARMCX4Q5H9R4 360 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 FAM228AQ86W67 206 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 FAM13CQ8NE31 585 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 RORBQ92753 470 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 KCTD15Q96SI1 283 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-203ENST00000441123 ADAM2Q99965 735 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 C1orf50Q9BV19 199 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 FAM53CQ9NYF3 392 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 DLGAP3O95886 979 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 RPN2P04844 631 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 TFEBP19484 476 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PTPN3P26045 913 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 MAP2K5Q13163 448 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 NAIF1Q69YI7 327 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-203ENST00000441123 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 OOSP2Q86WS3 158 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 CLVS1Q8IUQ0 354 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-203ENST00000441123 ABHD8Q96I13 439 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 ATXN3LQ9H3M9 355 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PDZD7Q9H5P4 517 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PALMDQ9NP74 551 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PCDHB12Q9Y5F1 795 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms