RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ERI2A8K979 691 aaKnown RBP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 CCNCP24863 283 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 KDSRQ06136 332 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 MRPL58Q14197 206 aaKnown RBP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 TRMT5Q32P41 509 aaKnown RBP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 C6orf163Q5TEZ5 329 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 NAPEPLDQ6IQ20 393 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 RAPH1Q70E73 1250 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 ARHGAP12Q8IWW6 846 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 ST13P4Q8IZP2 240 aaPredicted RBP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 CERS2Q96G23 380 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 RBM22Q9NW64 420 aaKnown RBP eCLIP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 PLA2G4CQ9UP65 541 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 NEU3Q9UQ49 428 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 PSAT1Q9Y617 370 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 CAPN14A8MX76 684 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 TM7SF2O76062 418 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 F7P08709 466 aaPredicted RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 DHRS4L1P0CG22 281 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 ETV4P43268 484 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 ACTR3P61158 418 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 TLE2Q04725 743 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 SLC18A2Q05940 514 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 ITKQ08881 620 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 CBLBQ13191 982 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 C1orf146Q5VVC0 180 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 FAM91A1Q658Y4 838 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 RAP1GAP2Q684P5 730 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 CHSY1Q86X52 802 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 RTL3Q8N8U3 475 aaKnown RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 ATP6V0D2Q8N8Y2 350 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 BCL7CQ8WUZ0 217 aaPredicted RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 MFSD3Q96ES6 412 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 FSD1LQ9BXM9 530 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 PAK6Q9NQU5 681 aaPredicted RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 PPARGC1AQ9UBK2 798 aaKnown RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 SLC7A8Q9UHI5 535 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 TBC1D30Q9Y2I9 924 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 SCN5AQ14524 2016 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 MAFKO60675 156 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 PMPCBO75439 489 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 RFPL1O75677 317 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 TOP3BO95985 862 aaKnown RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 OR1D2P34982 312 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 TRIM60Q495X7 471 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 STEAP4Q687X5 459 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 PACS1Q6VY07 963 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 FBXO22Q8NEZ5 403 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 PABPC5Q96DU9 382 aaKnown RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 RPRD1AQ96P16 312 aaPredicted RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 CCSER2Q9H7U1 834 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 CHRAC1Q9NRG0 131 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 IPO11Q9UI26 975 aaKnown RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 ATP11BQ9Y2G3 1177 aa14.35□□□□□ -0.11
LIMD1-202ENST00000440097 AAR2Q9Y312 384 aaKnown RBP14.35□□□□□ -0.11
LIMD1-202ENST00000440097 E2F8A0AVK6 867 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 HMX2A2RU54 273 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 GOLGA8TH3BQL2 631 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 BUD23O43709 281 aaKnown RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 TLR5O60602 858 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 ALDH1A2O94788 518 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 HTR7P34969 479 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 CCNFP41002 786 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 RPL10AP62906 217 aaKnown RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 CDH17Q12864 832 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 MS4A13Q5J8X5 152 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 SPANXN3Q5MJ09 141 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 MANEALQ5VSG8 457 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 NAT14Q8WUY8 206 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 ZNF512Q96ME7 567 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 FCRL3Q96P31 734 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 MECRQ9BV79 373 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 ZYG11BQ9C0D3 744 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 ATXN3LQ9H3M9 355 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 CCDC195A0A1B0GUA6 201 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 MATN3O15232 486 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 GRIA2P42262 883 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 POU6F1Q14863 301 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 PCSK7Q16549 785 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 LRRC36Q1X8D7 754 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 HSF5Q4G112 596 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 HSP90AA5PQ58FG0 334 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 TIGD7Q6NT04 549 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 MSANTD2Q6P1R3 559 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 ACAD11Q709F0 780 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 CIR1Q86X95 450 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 BTN2A3PQ96KV6 586 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 PREBQ9HCU5 417 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 OLA1Q9NTK5 396 aaKnown RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 C20orf96Q9NUD7 363 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 CHCHD3Q9NX63 227 aaKnown RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 CLIC5Q9NZA1 410 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 SH3BP1Q9Y3L3 701 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 PATJQ8NI35 1801 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 SPECC1L-ADORA2AF8WAN1 911 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 ADAM12O43184 909 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms