RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HMGB4Q8WW32 186 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 APOPT1Q96IL0 206 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MAGEB5Q9BZ81 275 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MMADHCQ9H3L0 296 aaPredicted RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 FBXO44Q9H4M3 255 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 METTL5Q9NRN9 209 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 FGFR1OP2Q9NVK5 253 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 CACNA2D2Q9NY47 1150 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 RRN3Q9NYV6 651 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MTO1Q9Y2Z2 717 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TEX264Q9Y6I9 313 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TICRRQ7Z2Z1 1910 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 PATJQ8NI35 1801 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 DSPP15924 2871 aaKnown RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 HHLA1C9JL84 531 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 APOL1O14791 398 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 ECI2O75521 394 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 KRT37O76014 449 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 RTN3O95197 1032 aaPredicted RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 HLA-EP13747 358 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 TYRP14679 529 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 AOC1P19801 751 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 GCKP35557 465 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 GJC1P36383 396 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SLCO1A2P46721 670 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SGSHP51688 502 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 NEK3P51956 506 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 DGKEP52429 567 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 WDR4P57081 412 aaKnown RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 GPX6P59796 221 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 PFKPQ01813 784 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF33AQ06730 810 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SMARCB1Q12824 385 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 TCF15Q12870 199 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 DHCR24Q15392 516 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 FAM102AQ5T9C2 384 aaPredicted RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 FBXW10Q5XX13 1052 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 STEAP4Q687X5 459 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 FAM124AQ86V42 546 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 LCA5Q86VQ0 697 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SLC26A11Q86WA9 606 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF354CQ86Y25 554 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 RFX6Q8HWS3 928 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 C1orf210Q8IVY1 113 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 PALM2Q8IXS6 379 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 ZBED8Q8IZ13 594 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 ADGRG2Q8IZP9 1017 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 ARFGAP1Q8N6T3 406 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 TXNDC5Q8NBS9 432 aaKnown RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 CYB5D2Q8WUJ1 264 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 DCAKDQ8WVC6 231 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 FAM122AQ96E09 287 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 P2RY11Q96G91 374 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 RPL10LQ96L21 214 aaKnown RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 C8orf48Q96LL4 319 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 C9orf72Q96LT7 481 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 PPP1R2P1Q96PQ5 205 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 VPS37BQ9H9H4 285 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 CD93Q9NPY3 652 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 ARHGEF4Q9NR80 690 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 WNT16Q9UBV4 365 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 PHTF1Q9UMS5 762 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 IGF2RP11717 2491 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 CHURC1-FNTBB4DL54 471 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 UBOX5O94941 541 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 CYP17A1P05093 508 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 RBP3P10745 1247 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 KRT10P13645 584 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 MAGEA11P43364 429 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 FNTBP49356 437 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 HK2P52789 917 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 RPS24P62847 133 aaKnown RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 GRSF1Q12849 480 aaKnown RBP eCLIP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 MPP2Q14168 576 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 EFHC1Q5JVL4 640 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 ZFYVE27Q5T4F4 411 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SH3PXD2AQ5TCZ1 1133 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SCYL2Q6P3W7 929 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 OLFML1Q6UWY5 402 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 CYP4V2Q6ZWL3 525 aaPredicted RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 BNIPLQ7Z465 357 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 TFAP2DQ7Z6R9 452 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 GPR65Q8IYL9 337 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 KIAA2013Q8IYS2 634 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 CYP4X1Q8N118 509 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SCML4Q8N228 414 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SLC35F5Q8WV83 523 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 OSCP1Q8WVF1 389 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 C10orf82Q8WW14 230 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 KCTD13Q8WZ19 329 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 SHDQ96IW2 340 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 C7orf26Q96N11 449 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 QKIQ96PU8 341 aaKnown RBP eCLIP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 LRRC37BQ96QE4 947 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 PAFAH2Q99487 392 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 P2RY13Q9BPV8 354 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 OXCT2Q9BYC2 517 aaPredicted RBP4.84□□□□□ -1.63
EDEM3-203ENST00000439962 KIF9Q9HAQ2 790 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 322.4 ms