RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 SHBQ15464 509 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 POM121L1PQ3SYA9 428 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 CARD16Q5EG05 197 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 ARSIQ5FYB1 569 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 TBC1D3GQ6DHY5 549 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 TBC1D3CQ6IPX1 549 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 NAPEPLDQ6IQ20 393 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 CYP4V2Q6ZWL3 525 aaPredicted RBP11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 ERN2Q76MJ5 926 aaKnown RBP11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 IQCHQ86VS3 1027 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 TBC1D3Q8IZP1 549 aaPredicted RBP11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 UMODL1-AS1Q8N2C9 162 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 MFSD2AQ8NA29 543 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 TMEM145Q8NBT3 493 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 SERAC1Q96JX3 654 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 UBL7Q96S82 380 aaPredicted RBP11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 ERVMER34-1Q9H9K5 563 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 BTBD3Q9Y2F9 522 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 PTPRBP23467 1997 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 TMEM131Q92545 1883 aa11.68□□□□□ -0.54
GTF3C5-206ENST00000439697 ZSCAN5CA6NGD5 496 aaPredicted RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 EIF3CLB5ME19 914 aaKnown RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 TLR4O00206 839 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 KPNA3O00505 521 aaPredicted RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 KCNK3O14649 394 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 GSRP00390 522 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 SKILP12757 684 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 PTMSP20962 102 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 ITGB7P26010 798 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 CCT8P50990 548 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 CLDN6P56747 220 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 UBASH3AP57075 661 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 GEMIN4P57678 1058 aaKnown RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 NXPH1P58417 271 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 YBEYP58557 167 aaPredicted RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 KLHL30Q0D2K2 578 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 CCDC15Q0P6D6 951 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 OVGP1Q12889 678 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 ZNF284Q2VY69 593 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 ZSCAN23Q3MJ62 389 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 TMEM259Q4ZIN3 620 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 INO80DQ53TQ3 878 aaPredicted RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 SCYL2Q6P3W7 929 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 PRPF39Q86UA1 669 aaKnown RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 GRIN3AQ8TCU5 1115 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 RHBDD1Q8TEB9 315 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 PEBP4Q96S96 227 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 ELF4Q99607 663 aaPredicted RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 EIF3CQ99613 913 aaKnown RBP11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 EPAS1Q99814 870 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 HEPHQ9BQS7 1158 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 KLC2Q9H0B6 622 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 LRRC19Q9H756 370 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 DKK4Q9UBT3 224 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 CAPN11Q9UMQ6 739 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 RAI2Q9Y5P3 530 aa11.67□□□□□ -0.54
GTF3C5-206ENST00000439697 MYO18BQ8IUG5 2567 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 A0A1W2PQU0 124 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 PRAMEF26H0Y7S4 382 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 FGF10O15520 208 aaPredicted RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 AP1G1O43747 822 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 RNGTTO60942 597 aaKnown RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 LRCH4O75427 683 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 MYBL1P10243 752 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 PSMA2P25787 234 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 MAT2AP31153 395 aaKnown RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 GRK6P43250 576 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 RECQLP46063 649 aaPredicted RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 RXRGP48443 463 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 C21orf59P57076 290 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 ZBED6P86452 979 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 SERINC3Q13530 473 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 SUZ12Q15022 739 aaKnown RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 CA9Q16790 459 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 PARP15Q460N3 678 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 SETMARQ53H47 684 aaPredicted RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 AFMIDQ63HM1 303 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 KANSL1Q7Z3B3 1105 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 ADAT2Q7Z6V5 191 aaKnown RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 HORMAD1Q86X24 394 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 SPATS2Q86XZ4 545 aaKnown RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 PSTKQ8IV42 348 aaKnown RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 OR2AP1Q8NGE2 309 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 SAP25Q8TEE9 199 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 CASKIN2Q8WXE0 1202 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 SKA1Q96BD8 255 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 IQCDQ96DY2 449 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 HMCESQ96FZ2 354 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 PPP1R16AQ96I34 528 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 TM6SF2Q9BZW4 377 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 CATSPERBQ9H7T0 1116 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 PDFQ9HBH1 243 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 GDF3Q9NR23 364 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 AASDHPPTQ9NRN7 309 aa11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 HECAQ9UBI9 543 aaPredicted RBP11.66□□□□□ -0.54
GTF3C5-206ENST00000439697 CNOT8Q9UFF9 292 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms