RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 HBP1O60381 514 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 ZC3H11AO75152 810 aaKnown RBP eCLIP3.74□□□□□ -1.81
VPS41-207ENST00000439468 SERPINC1P01008 464 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 IL1AP01583 271 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 GALTP07902 379 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 CHRNB1P11230 501 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 HOXB6P17509 224 aaKnown RBP3.74□□□□□ -1.81
VPS41-207ENST00000439468 STAT1P42224 750 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 GPD2P43304 727 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 POLD2P49005 469 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 ARSFP54793 590 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 LINC00205P59089 165 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 MST1RQ04912 1400 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 SMTNL2Q2TAL5 461 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 PRTGQ2VWP7 1150 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 MANEAQ5SRI9 462 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 HYIQ5T013 277 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 VWA5B1Q5TIE3 1220 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 DAB2IPQ5VWQ8 1189 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 TBC1D9BQ66K14 1250 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 AAGABQ6PD74 315 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 CLEC4GQ6UXB4 293 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 LRIG3Q6UXM1 1119 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 DSTYKQ6XUX3 929 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 PRSS45Q7RTY3 260 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 UBE2Q1Q7Z7E8 422 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 PIP4P1Q86T03 277 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 WDR5BQ86VZ2 330 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 DIS3L2Q8IYB7 885 aaKnown RBP3.74□□□□□ -1.81
VPS41-207ENST00000439468 SAMD14Q8IZD0 417 aaPredicted RBP3.74□□□□□ -1.81
VPS41-207ENST00000439468 RASSF8Q8NHQ8 419 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 NFKBIDQ8NI38 313 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 MPLKIPQ8TAP9 179 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 METTL6Q8TCB7 284 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 GDPD5Q8WTR4 605 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 CENPIQ92674 756 aaPredicted RBP3.74□□□□□ -1.81
VPS41-207ENST00000439468 ATOH1Q92858 354 aaPredicted RBP3.74□□□□□ -1.81
VPS41-207ENST00000439468 SH3KBP1Q96B97 665 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 TUBB6Q9BUF5 446 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 GLIS2Q9BZE0 524 aaPredicted RBP3.74□□□□□ -1.81
VPS41-207ENST00000439468 SPAG4Q9NPE6 437 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 PAPOLBQ9NRJ5 636 aaKnown RBP3.74□□□□□ -1.81
VPS41-207ENST00000439468 SNTG1Q9NSN8 517 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 OSGIN2Q9Y236 505 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 KDM3AQ9Y4C1 1321 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 A0A087X0M5 115 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 TRBV5-3A0A0A0MS03 114 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 IGLV5-39A0A0G2JS06 123 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 C17orf113A0A1B0GUU1 675 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 A0A1B0GX30 115 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 A0A1W2PQM1 296 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 PGPEP1LA6NFU8 196 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 NPIPB15A6NHN6 443 aaPredicted RBP3.73□□□□□ -1.81
VPS41-207ENST00000439468 FAM157AC9JC47 383 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 KCNAB3O43448 404 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 SEC31AO94979 1220 aaKnown RBP3.73□□□□□ -1.81
VPS41-207ENST00000439468 OAZ2O95190 189 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 COX7A2P14406 83 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 DPP6P42658 865 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 DCAF7P61962 342 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 TWIST1Q15672 202 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 EDRF1Q3B7T1 1238 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 ASPHD1Q5U4P2 390 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 TMEM81Q6P7N7 255 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 IL20RBQ6UXL0 311 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 ZNF517Q6ZMY9 492 aaPredicted RBP3.73□□□□□ -1.81
VPS41-207ENST00000439468 CPLX4Q7Z7G2 160 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 GPAT4Q86UL3 456 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 FAM160B2Q86V87 743 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 ZDHHC17Q8IUH5 632 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 DDIASQ8IXT1 998 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 MMP21Q8N119 569 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 LRRC57Q8N9N7 239 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 BCAS4Q8TDM0 211 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 SLC25A28Q96A46 364 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 MSI2Q96DH6 328 aaKnown RBP3.73□□□□□ -1.81
VPS41-207ENST00000439468 C7orf26Q96N11 449 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 FRG2BQ96QU4 278 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 NR1H4Q96RI1 486 aaPredicted RBP3.73□□□□□ -1.81
VPS41-207ENST00000439468 PIP5K1AQ99755 562 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 NUF2Q9BZD4 464 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 TMX4Q9H1E5 349 aaPredicted RBP3.73□□□□□ -1.81
VPS41-207ENST00000439468 BRF2Q9HAW0 419 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 DECR2Q9NUI1 292 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 BABAM1Q9NWV8 329 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 TAS2R10Q9NYW0 307 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 GRHL1Q9NZI5 618 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 KCND2Q9NZV8 630 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 HCN3Q9P1Z3 774 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 FBXO9Q9UK97 447 aaPredicted RBP3.73□□□□□ -1.81
VPS41-207ENST00000439468 PSAT1Q9Y617 370 aa3.73□□□□□ -1.81
VPS41-207ENST00000439468 TTBK1Q5TCY1 1321 aaPredicted RBP3.72□□□□□ -1.81
VPS41-207ENST00000439468 IGKV2D-30A0A075B6S6 120 aa3.72□□□□□ -1.81
VPS41-207ENST00000439468 A0A0G2JK05 382 aa3.72□□□□□ -1.81
VPS41-207ENST00000439468 KIR2DS5A0A0G2JLQ3 304 aa3.72□□□□□ -1.81
VPS41-207ENST00000439468 KIR2DS3K7RE56 304 aa3.72□□□□□ -1.81
VPS41-207ENST00000439468 DOK2O60496 412 aa3.72□□□□□ -1.81
VPS41-207ENST00000439468 RNASEH2AO75792 299 aaKnown RBP3.72□□□□□ -1.81
VPS41-207ENST00000439468 BAIAP3O94812 1187 aa3.72□□□□□ -1.81
VPS41-207ENST00000439468 TMCC1O94876 653 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms