RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C21orf59P57076 290 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 TAS2R38P59533 333 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 SLC25A11Q02978 314 aaKnown RBP25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 MYLK3Q32MK0 819 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 SETMARQ53H47 684 aaPredicted RBP25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 SLC45A4Q5BKX6 768 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 FBXL19Q6PCT2 694 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 POLNQ7Z5Q5 900 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 SERAC1Q96JX3 654 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 SLC6A18Q96N87 628 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 PACSIN1Q9BY11 444 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 SLC39A8Q9C0K1 460 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 GAREM1Q9H706 876 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 EBF2Q9HAK2 575 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 AASDHPPTQ9NRN7 309 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 ANKRD6Q9Y2G4 727 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 SPTBN2O15020 2390 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 KRIT1O00522 736 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 VILLO15195 856 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 PRAMEF11O60813 436 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 GJB3O75712 270 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 ZNF883P0CG24 379 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 CEACAM1P13688 526 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 PAPOLAP51003 745 aaKnown RBP25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 KIF19Q2TAC6 998 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 AFMIDQ63HM1 303 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 NAPEPLDQ6IQ20 393 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 PSAPL1Q6NUJ1 521 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 OR6K2Q8NGY2 324 aa25.12■■□□□ 1.61
RAPGEF1-206ENST00000438647 PROSCO94903 275 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 ADRB3P13945 408 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 CD38P28907 300 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 MAT2AP31153 395 aaKnown RBP25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 BNC1Q01954 994 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 KRT81Q14533 505 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 HLA-BQ31612 363 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 ZNF805Q5CZA5 627 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 ATXN7L2Q5T6C5 722 aaPredicted RBP25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 TMCO3Q6UWJ1 677 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 ARHGAP12Q8IWW6 846 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 CSPG4P5Q96PW8 444 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 SP110Q9HB58 689 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 PDFQ9HBH1 243 aa25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 RCOR3Q9P2K3 495 aaPredicted RBP25.11■■□□□ 1.61
RAPGEF1-206ENST00000438647 RNF103O00237 685 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 DFFAO00273 331 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 RNGTTO60942 597 aaKnown RBP25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 SERPINB6P35237 376 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 TXNRD3NBQ6F5E7 133 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 ZSCAN30Q86W11 494 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 HORMAD1Q86X24 394 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 NPWQ8N729 165 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 RAB7BQ96AH8 199 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 RBSNQ9H1K0 784 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 PCDH18Q9HCL0 1135 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 SPTLC3Q9NUV7 552 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 MFHAS1Q9Y4C4 1052 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 SNX11Q9Y5W9 270 aa25.1■■□□□ 1.61
RAPGEF1-206ENST00000438647 A0A1W2PQU0 124 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 J3KR12 359 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 AP1G1O43747 822 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 DFNA5O60443 496 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 PCDH8O95206 1070 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 UGT2B4P06133 528 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 ADRB1P08588 477 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 GKP32189 559 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 MAN1A1P33908 653 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 CDH6P55285 790 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 RFTN1Q14699 578 aaPredicted RBP25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 GRM3Q14832 879 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 LAYNQ6UX15 382 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 GDPD4Q6W3E5 623 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 PARS2Q7L3T8 475 aaKnown RBP25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 PIP4P1Q86T03 277 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 RHOT2Q8IXI1 618 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 DEFB124Q8NES8 71 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 ANP32EQ9BTT0 268 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 TM7SF3Q9NS93 570 aa25.09■■□□□ 1.61
RAPGEF1-206ENST00000438647 C16orf96A6NNT2 1141 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 PRAMEF26H0Y7S4 382 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 MAGEC1O60732 1142 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 PALMO75781 387 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 KRT7P08729 469 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 CD59P13987 128 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 AMPD1P23109 780 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 CTSKP43235 329 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 IL10RBQ08334 325 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 HNRNPDQ14103 355 aaKnown RBP25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 STAT4Q14765 748 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 CYTH1Q15438 398 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 KIAA1161Q6NSJ0 714 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 MRFAP1L1Q96HT8 127 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 CPEB1Q9BZB8 566 aaKnown RBP25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 LHX3Q9UBR4 397 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 IPO11Q9UI26 975 aaKnown RBP25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 INTUQ9ULD6 942 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 FADS3Q9Y5Q0 445 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 PLXNA2O75051 1894 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 KNL1Q8NG31 2342 aa25.08■■□□□ 1.61
RAPGEF1-206ENST00000438647 ZNF75DP51815 510 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms