RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 C2CD4BA6NLJ0 364 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 LRIG2O94898 1065 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 EEF1GP26641 437 aaKnown RBP18.48■□□□□ 0.55
GTF3A-204ENST00000438571 ADRA1BP35368 520 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 HDAC4P56524 1084 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 JAM2P57087 298 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 POLR2FP61218 127 aaKnown RBP18.48■□□□□ 0.55
GTF3A-204ENST00000438571 CDR2Q01850 454 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 FZD2Q14332 565 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 KRT31Q15323 416 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 KIAA1161Q6NSJ0 714 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 RWDD4Q6NW29 188 aaKnown RBP18.48■□□□□ 0.55
GTF3A-204ENST00000438571 APOLD1Q96LR9 279 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 KLF6Q99612 283 aaPredicted RBP18.48■□□□□ 0.55
GTF3A-204ENST00000438571 FAM207AQ9NSI2 230 aaPredicted RBP18.48■□□□□ 0.55
GTF3A-204ENST00000438571 OR12D3Q9UGF7 316 aa18.48■□□□□ 0.55
GTF3A-204ENST00000438571 IGLON5A6NGN9 336 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 PRB1P04280 392 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 SDC4P31431 198 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 SOX5P35711 763 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 RPS21P63220 83 aaKnown RBP18.47■□□□□ 0.55
GTF3A-204ENST00000438571 NRG1Q02297 640 aaPredicted RBP18.47■□□□□ 0.55
GTF3A-204ENST00000438571 CCDC15Q0P6D6 951 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 ATXN7L2Q5T6C5 722 aaPredicted RBP18.47■□□□□ 0.55
GTF3A-204ENST00000438571 ACBD5Q5T8D3 534 aaPredicted RBP18.47■□□□□ 0.55
GTF3A-204ENST00000438571 CDKAL1Q5VV42 579 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 PYROXD2Q8N2H3 581 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 RYBPQ8N488 228 aaPredicted RBP18.47■□□□□ 0.55
GTF3A-204ENST00000438571 ZNF548Q8NEK5 533 aaPredicted RBP18.47■□□□□ 0.55
GTF3A-204ENST00000438571 SNIP1Q8TAD8 396 aaKnown RBP18.47■□□□□ 0.55
GTF3A-204ENST00000438571 KLC2Q9H0B6 622 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 TMEM248Q9NWD8 314 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 PNMA8BQ9ULN7 279 aaPredicted RBP18.47■□□□□ 0.55
GTF3A-204ENST00000438571 SCN8AQ9UQD0 1980 aa18.47■□□□□ 0.55
GTF3A-204ENST00000438571 C16orf96A6NNT2 1141 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 K7ESM1 405 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 CASC3O15234 703 aaKnown RBP18.46■□□□□ 0.55
GTF3A-204ENST00000438571 AP1G1O43747 822 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 UGT2B4P06133 528 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 CKMT1AP12532 417 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 UNGP13051 313 aaPredicted RBP18.46■□□□□ 0.55
GTF3A-204ENST00000438571 RHOQP17081 205 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 ITIH2P19823 946 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 SLC20A2Q08357 652 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 CDCP2Q5VXM1 449 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 ZNF677Q86XU0 584 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 RBFAQ8N0V3 343 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 FAM172AQ8WUF8 416 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 TBC1D31Q96DN5 1066 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 OSBPL2Q9H1P3 480 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 TCEAL2Q9H3H9 227 aaPredicted RBP18.46■□□□□ 0.55
GTF3A-204ENST00000438571 PRORYQ9H606 182 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 NOL6Q9H6R4 1146 aaKnown RBP18.46■□□□□ 0.55
GTF3A-204ENST00000438571 NLGN3Q9NZ94 848 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 SIK3Q9Y2K2 1263 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 HS3ST3A1Q9Y663 406 aa18.46■□□□□ 0.55
GTF3A-204ENST00000438571 SPTY2D1-AS1A0A0U1RR47 76 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 KRIT1O00522 736 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 OPA1O60313 960 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 NME1P15531 152 aaKnown RBP18.45■□□□□ 0.54
GTF3A-204ENST00000438571 IGFALSP35858 605 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 PTPN9P43378 593 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 MAPKAPK2P49137 400 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 EIF2B5Q13144 721 aaKnown RBP18.45■□□□□ 0.54
GTF3A-204ENST00000438571 PDE1CQ14123 709 aaPredicted RBP18.45■□□□□ 0.54
GTF3A-204ENST00000438571 STRADAQ7RTN6 431 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 CACTIN-AS1Q8N1I8 211 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 OR2AP1Q8NGE2 309 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 ENOX1Q8TC92 643 aaKnown RBP18.45■□□□□ 0.54
GTF3A-204ENST00000438571 CENPIQ92674 756 aaPredicted RBP18.45■□□□□ 0.54
GTF3A-204ENST00000438571 FEM1CQ96JP0 617 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 KLHL32Q96NJ5 620 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 C1QTNF2Q9BXJ5 285 aa18.45■□□□□ 0.54
GTF3A-204ENST00000438571 SCAMP1O15126 338 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 GSRP00390 522 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 CSF2P04141 144 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 MPOP05164 745 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 PLEKP08567 350 aaPredicted RBP18.44■□□□□ 0.54
GTF3A-204ENST00000438571 RFC1P35251 1148 aaPredicted RBP18.44■□□□□ 0.54
GTF3A-204ENST00000438571 E2F1Q01094 437 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 C1QBPQ07021 282 aaKnown RBP18.44■□□□□ 0.54
GTF3A-204ENST00000438571 CCDC173Q0VFZ6 552 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 TBC1D25Q3MII6 688 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 ARL13BQ3SXY8 428 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 HS1BP3Q53T59 392 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 ZNF805Q5CZA5 627 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 PARGQ86W56 976 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 ISG20Q96AZ6 181 aaKnown RBP18.44■□□□□ 0.54
GTF3A-204ENST00000438571 IFT43Q96FT9 208 aa18.44■□□□□ 0.54
GTF3A-204ENST00000438571 ARHGEF17Q96PE2 2063 aaPredicted RBP18.44■□□□□ 0.54
GTF3A-204ENST00000438571 MGAQ8IWI9 3026 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 TCRBV5S1A1TA0A578 114 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 CCP110O43303 1012 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 RAMP2O60895 175 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 TMCC1O94876 653 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 ALPPL2P10696 532 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 GPD1P21695 349 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 RABIFP47224 123 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 PFN3P60673 137 aa18.43■□□□□ 0.54
GTF3A-204ENST00000438571 HNRNPKP61978 463 aaKnown RBP eCLIP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms