RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 STAT4Q14765 748 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 NUGGCQ68CJ6 796 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 TBC1D3GQ6DHY5 549 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 TBC1D3CQ6IPX1 549 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 SPATS2Q86XZ4 545 aaKnown RBP8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 MFN1Q8IWA4 741 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 CCDC117Q8IWD4 279 aaPredicted RBP8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 SULF2Q8IWU5 870 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 TBC1D3Q8IZP1 549 aaPredicted RBP8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 ANKRD52Q8NB46 1076 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 HJURPQ8NCD3 748 aaPredicted RBP8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 OR4C6Q8NH72 309 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 OR14C36Q8NHC7 312 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 AZIN2Q96A70 460 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 MRGPRX3Q96LB0 322 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 DDX50Q9BQ39 737 aaKnown RBP8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 SLC39A2Q9NP94 309 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 ABCC13Q9NSE7 274 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 IL17BQ9UHF5 180 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 PCDHB1Q9Y5F3 818 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 ITIH6Q6UXX5 1313 aa8.68□□□□□ -1.02
NIF3L1-208ENST00000436412 PRRC2CQ9Y520 2896 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 K7ENP7 123 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 TRIM38O00635 465 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 PDXKO00764 312 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 MAPK13O15264 365 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 SLC7A4O43246 635 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 MOCS3O95396 460 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 ALPPL2P10696 532 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 CKMT1AP12532 417 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 CD58P19256 250 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 ARNTP27540 789 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 CSKP41240 450 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 NASPP49321 788 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 DUSP3P51452 185 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 ENPEPQ07075 957 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 ELAVL3Q14576 367 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 BSPRYQ5W0U4 402 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 ARHGAP17Q68EM7 881 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 INO80CQ6PI98 192 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 TRIM69Q86WT6 500 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 SMYD4Q8IYR2 804 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 SCML4Q8N228 414 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 SLC25A45Q8N413 288 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 AADATQ8N5Z0 425 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 WFDC5Q8TCV5 224 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 FAM131CQ96AQ9 280 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 DHX58Q96C10 678 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 VCPIP1Q96JH7 1222 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 LMLNQ96KR4 655 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 IPO9Q96P70 1041 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 USP28Q96RU2 1077 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 ULBP1Q9BZM6 244 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 MTG2Q9H4K7 406 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 APOBEC3GQ9HC16 384 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 ASCL3Q9NQ33 180 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 KLHL11Q9NVR0 708 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 ARHGAP20Q9P2F6 1191 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 FRMD4BQ9Y2L6 1034 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 HEMK1Q9Y5R4 338 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 BSNQ9UPA5 3926 aa8.67□□□□□ -1.02
NIF3L1-208ENST00000436412 UTP20O75691 2785 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 ABCA12Q86UK0 2595 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 NEMP2A6NFY4 417 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 PRAMEF26H0Y7S4 382 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 XPO1O14980 1071 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 ACSL4O60488 711 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 PPP6R2O75170 966 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 CSO75390 466 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 NME2P22392 152 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 DGKAP23743 735 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 RBMS1P29558 406 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 NNMTP40261 264 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 PSMD8P48556 350 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 VAMP7P51809 220 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 ECT2LQ008S8 904 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 CDH18Q13634 790 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 STK38Q15208 465 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 ZNF394Q53GI3 561 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 SETMARQ53H47 684 aaPredicted RBP8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 ZC3H12AQ5D1E8 599 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 C1orf220Q5T0J3 134 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 RNF219Q5W0B1 726 aaPredicted RBP8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 MSANTD2Q6P1R3 559 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 FAM173BQ6P4H8 233 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 RFWD3Q6PCD5 774 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 BHLHA9Q7RTU4 235 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 DSG4Q86SJ6 1040 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 SLC4A11Q8NBS3 891 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 LINC00301Q8NCQ3 95 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 SLC46A1Q96NT5 459 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 ABCG4Q9H172 646 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 ZSCAN16Q9H4T2 348 aaPredicted RBP8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 LRRC4Q9HBW1 653 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 TJP2Q9UDY2 1190 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 SFMBT1Q9UHJ3 866 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 CYTH4Q9UIA0 394 aa8.66□□□□□ -1.02
NIF3L1-208ENST00000436412 INTS6Q9UL03 887 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms