RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SLC35G2Q8TBE7 412 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 RFFLQ8WZ73 363 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 PANX2Q96RD6 677 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 OSBPL1AQ9BXW6 950 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 PDFQ9HBH1 243 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 FSCN3Q9NQT6 498 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 J3KR12 359 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 DFFAO00273 331 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 KRIT1O00522 736 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 OPHN1O60890 802 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 MTA2O94776 668 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 AMPD1P23109 780 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 SERPINB6P35237 376 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 CYLC1P35663 651 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-207ENST00000435455 ARHGAP25P42331 645 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 CSNK1EP49674 416 aaKnown RBP16.51■□□□□ 0.23
SMPD4-207ENST00000435455 PPP2CBP62714 309 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 RACK1P63244 317 aaKnown RBP16.51■□□□□ 0.23
SMPD4-207ENST00000435455 PPP2CAP67775 309 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 MESDQ14696 234 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 UAP1L1Q3KQV9 507 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 ATXN7L2Q5T6C5 722 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-207ENST00000435455 NEK5Q6P3R8 708 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 IL27RAQ6UWB1 636 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 PRPF39Q86UA1 669 aaKnown RBP16.51■□□□□ 0.23
SMPD4-207ENST00000435455 MAP7D3Q8IWC1 876 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 MINDY1Q8N5J2 469 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 NPWQ8N729 165 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 FAM71BQ8TC56 605 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 TSC1Q92574 1164 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 SKA1Q96BD8 255 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 ORAI3Q9BRQ5 295 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 SP110Q9HB58 689 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 LUC7LQ9NQ29 371 aaKnown RBP16.51■□□□□ 0.23
SMPD4-207ENST00000435455 MFHAS1Q9Y4C4 1052 aa16.51■□□□□ 0.23
SMPD4-207ENST00000435455 TRPM6Q9BX84 2022 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 TMEM110-MUSTN1A8MSY1 372 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 GJC1P36383 396 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 TAS2R38P59533 333 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 FOXK2Q01167 660 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 IL10RBQ08334 325 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 RFTN1Q14699 578 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-207ENST00000435455 GRM3Q14832 879 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 PDK2Q15119 407 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 TCEAL1Q15170 157 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 CYTH1Q15438 398 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 ZNF805Q5CZA5 627 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 FBXL19Q6PCT2 694 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 ADAT2Q7Z6V5 191 aaKnown RBP16.5■□□□□ 0.23
SMPD4-207ENST00000435455 KCTD6Q8NC69 237 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 OR6K2Q8NGY2 324 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 RAB7BQ96AH8 199 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 ETNK2Q9NVF9 386 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 DNAAF2Q9NVR5 837 aaKnown RBP16.5■□□□□ 0.23
SMPD4-207ENST00000435455 LHX3Q9UBR4 397 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 IPO11Q9UI26 975 aaKnown RBP16.5■□□□□ 0.23
SMPD4-207ENST00000435455 DMTF1Q9Y222 760 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 SLCO1B1Q9Y6L6 691 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 DOCK9Q9BZ29 2069 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 CABIN1Q9Y6J0 2220 aa16.5■□□□□ 0.23
SMPD4-207ENST00000435455 TP53BP1Q12888 1972 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-207ENST00000435455 A0A1B0GVT2 93 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 C16orf96A6NNT2 1141 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 UPK3BL1B0FP48 263 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 UPK3BL2E5RIL1 263 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 RNF103O00237 685 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 AP1G1O43747 822 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 RNGTTO60942 597 aaKnown RBP16.49■□□□□ 0.23
SMPD4-207ENST00000435455 PALMO75781 387 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 LCA5LO95447 670 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 CER1O95813 267 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 UGT2B4P06133 528 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 ADRB3P13945 408 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 MAGEA1P43355 309 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 ARSEP51690 589 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 SLC14A1Q13336 389 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 SPA17Q15506 151 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 SETMARQ53H47 684 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-207ENST00000435455 SLC45A4Q5BKX6 768 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 TMCO4Q5TGY1 634 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 NAPEPLDQ6IQ20 393 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 GDPD4Q6W3E5 623 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 PARS2Q7L3T8 475 aaKnown RBP16.49■□□□□ 0.23
SMPD4-207ENST00000435455 CPNE8Q86YQ8 564 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 LRRC49Q8IUZ0 686 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 SERAC1Q96JX3 654 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 ZNF599Q96NL3 588 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 ZNF670Q9BS34 389 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 CALN1Q9BXU9 219 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 CPEB1Q9BZB8 566 aaKnown RBP16.49■□□□□ 0.23
SMPD4-207ENST00000435455 EBF2Q9HAK2 575 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 AASDHPPTQ9NRN7 309 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 ANKRD6Q9Y2G4 727 aa16.49■□□□□ 0.23
SMPD4-207ENST00000435455 SHROOM3Q8TF72 1996 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 VILLO15195 856 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 PCDH8O95206 1070 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 FECHP22830 423 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 CD38P28907 300 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 MAT2AP31153 395 aaKnown RBP16.48■□□□□ 0.23
SMPD4-207ENST00000435455 GKP32189 559 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms