RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TSPAN17Q96FV3 270 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ELMO2Q96JJ3 720 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 FAR2Q96K12 515 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 TTC1Q99614 292 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ADAM2Q99965 735 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 MRPL57Q9BQC6 102 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 MRPL46Q9H2W6 279 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 FBXO44Q9H4M3 255 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ARNT2Q9HBZ2 717 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 VPS45Q9NRW7 570 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 TREX1Q9NSU2 369 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 CPSF2Q9P2I0 782 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 SCN10AQ9Y5Y9 1956 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 E9PBE3 544 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PHGDHO43175 533 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 KLHL41O60662 606 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PAPSS2O95340 614 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 MT-CYBP00156 380 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 HLA-DQB2P05538 268 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SBK3P0C264 359 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 RHOQP17081 205 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SAT1P21673 171 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ATP5F1P24539 256 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 GABRB3P28472 473 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 GMPRP36959 345 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PAPOLAP51003 745 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 RENBPP51606 427 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 CLCN5P51795 746 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 EPHB1P54762 984 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 MTTPP55157 894 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SATB1Q01826 763 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 LAMB3Q13751 1172 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 HNRNPDQ14103 355 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 LPIN1Q14693 890 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 NFE2Q16621 373 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 PAN2Q504Q3 1202 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 ARL13AQ5H913 290 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 RALGPS1Q5JS13 557 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SH2D4BQ5SQS7 431 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 NEPROQ6NW34 567 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 RANBP10Q6VN20 620 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PIWIL4Q7Z3Z4 852 aaKnown RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 GALNT7Q86SF2 657 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 DHDDSQ86SQ9 333 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 MON1AQ86VX9 555 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 UMODL1-AS1Q8N2C9 162 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PHTF2Q8N3S3 785 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 TMEM151AQ8N4L1 468 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ATP6V0D2Q8N8Y2 350 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 PPP2R3CQ969Q6 453 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 FUBP3Q96I24 572 aaKnown RBP eCLIP10.55□□□□□ -0.72
CD44-210ENST00000434472 C8orf48Q96LL4 319 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 OR52B2Q96RD2 323 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 TMEM209Q96SK2 561 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ECSITQ9BQ95 431 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 OXCT2Q9BYC2 517 aaPredicted RBP10.55□□□□□ -0.72
CD44-210ENST00000434472 TRPV6Q9H1D0 765 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 ZDHHC7Q9NXF8 308 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SFMBT1Q9UHJ3 866 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 VPS28Q9UK41 221 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 FBXO5Q9UKT4 447 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SCML2Q9UQR0 700 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 TLR6Q9Y2C9 796 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 SSX2IPQ9Y2D8 614 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 INPP5FQ9Y2H2 1132 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 HS3ST4Q9Y661 456 aa10.55□□□□□ -0.72
CD44-210ENST00000434472 FNDC1Q4ZHG4 1894 aaPredicted RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 TRPM7Q96QT4 1865 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 PATJQ8NI35 1801 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 LOC100653049A0A140TA62 436 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 A0A1W2PQH9 124 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 GOLGA8TH3BQL2 631 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 TMEM189-UBE2V1I3L0A0 370 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 TK2O00142 265 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 SEPT4O43236 478 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 GRID2O43424 1007 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 ZBTB14O43829 449 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 PMPCBO75439 489 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 KRT34O76011 436 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 PGK1P00558 417 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 RBP1P09455 135 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 TFEBP19484 476 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 PPARGP37231 505 aaPredicted RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 AVPR1AP37288 418 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 SLC1A2P43004 574 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 NAGLUP54802 743 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 FCGRTP55899 365 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 WNT3AP56704 352 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 CYLC2Q14093 348 aaPredicted RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 CCNIQ14094 377 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 SEPT6Q14141 434 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 CNGA3Q16281 694 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 FAM83EQ2M2I3 478 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 LSM12Q3MHD2 195 aaKnown RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 AGAP9Q5VTM2 703 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 CST9Q5W186 159 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 KLC3Q6P597 504 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 KDELC1Q6UW63 502 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 IZUMO2Q6UXV1 221 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 FRMD7Q6ZUT3 714 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms